Gene CNC04980 details

Gene Information

• Locus tag: CNC04980
• ID: 3256336
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006685
• Strand: +
• Start bp: 1501295
• End bp: 1503486
• Gene Length: 2192 bp
• Protein Length: 522 aa
• GC content: 56%
• IMG OID: 638255716
• Product: capsular associated protein
• Protein accession: XP_569787
• Protein GI: 58265262

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.964514
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGCACTGCTG CTCGTCTTTC TCCTCCATCG TCCACCCCCA CGTGGCACAG CAGCTAGTCC 
CCGAGCCATG CTCAGAGAAG CCAAGGTCGG ACTCGACACC CCGTCTTCCG CCCCCCGCGC 
CTTTTCCGGT ACGTCCCCGC CCCGCCTTCC ACGCTTACCC CCGCAGGTGT GTCCCGCCGC 
ATATGGCTCC TGGTCGCCGT CGTCCTAGGC ATATTCACCT TCTCCCGTCT CCTCTTCCGT 
ACGCCCCTCC CCCCCCGCCC GGCCCATCCC GCTGACTTGC CCTGTAGCCG CGCACGACCC 
CCTCTCGTCC CTCGGCGTAG GCCTCCTTAC CTCAAAAGAC TATCTCAACG CGTCCGCCAC 
AGACCCCGCC CCATTCGAGT TCTGTCCCGT GTTTGGGCCC GGCGACGAGG TTGCCGCCAG 
GCGGGGGCAG TGGGGGCTGC TGAGAAGCAG ACTGCACATG GGCAGCGGCG CCCGCGTGCA 
GAGAGTGGTC CAGAAGGCCA TGGCCGGATT GCCCGTCACG ATCAGTGTCC TGGGCGGCTC 
AGGTGCGTTT TCCAGCTGTG CCACGTGGTT TGTGCTGGCT GAGCTGACGC GGGCCCGTAG 
TGTCCGCATG CCACGGTGCT GGCAACGACC CGGTATCGCC CGGATGCTAC CCAGCGCAGT 
TCTTTGACTG GTGGAACTCG GTTTTCCCGC ACCCGTCCTC GGAACTTACA AACGGAGCCT 
CGCGACGTAC CGACTCTGCC TACTTTGCGT ACTGCTCCAC CCACCACCTG CCTGATCAAA 
CCGATCTCGT CATTCTCGAG TTTGATGCGT CTGACCCCAA GTGAGTACCT TTACGGCCTT 
TTGAGATCGA GCTGATAAAA GCAGCGACCC CGAGTGGCTC GCTCATTTCG AGCTGCTCGT 
CAGAAGCATC CTTGTGAGAC CTGATCAGCC CGCTGTTATC GTTTTGGGAC ACTTTTCGCC 
TCAAATCCAG GCCCAAAATG GTTTTGCCGG TCCCGAGTTA TTACATACCG TGGTGGCTCA 
GTTCTACGAC GTCCCCCATA TCAGGTCAGT TTCATATCTT TTGACAGCCG TGGCATTTCT 
GATGAAAGAG TGACAACAGC GCCAAGGGAG TCTTATATGG CGACTACCTC GCTGAACCCG 
AAGCAGCTCG AAACACCTTC TTCACCGACC CTATCCTCGC CAACCCTACC GGCCACGGAG 
TCATTGCCGA TGTCCTCATT TCTTACATGC AGTCTCAAAT ATGTGCCGGA TGGGCCGCCA 
CTATGGGCCA CGCATTCGAT GTTCCTTATA TGGGTGCACC CGCGCTCGAA GATAATCTCG 
CCGGTGCGGG CATTCAGAGT GAGGAAGACC TAGAGTCCGA GGGAGGTGGC TTGGCCGCCA 
AGTTGCGAGC AATCAAGGTG CCGCAGGCGA TGCTCTCCGA CCGTCCCAGT GATATCCTCA 
AGTTCCGAGA AGTTGCGCCT TTTTGTGTCT CTGCGAACGA TTTGGTGAAC CCTTTGCCCC 
CAAGCCACTT TTACGGCTCC GGATGGCATG CATACCACCC AAGTAAAGGA GCCTCAGACG 
ACGAGAAGCA TTACTGGTAT TCTGATATTG GTGGTAGTAA GATGAGAGTG CCTGTGACGT 
TGAGCGCGGG CGATGTGGCT ATTTACTATT TACAGTGAGT TGCCTGTCTG CGGCTAAAAA 
GAAAAAGAAA AAGGGAAAGA AAGAAAAGCT GACAGCAGAA TAGGAGCCCG GCCGAGAATC 
CCTTGGGTCG AGCGGCTTGC TGGGTGGATG ACAACTTTGC GAGCGCAGTA GAATTGAGCG 
GAGTATCTGA TGTGCAGGAA GCCACGCCCA CGTATGTATA CCCCGCCATT CTTATGAAAA 
CTCCTGGGCG CTAATCCCTA ATCTGGGACG AATAGATTGA CTTTGATCGA CGAGAATGTC 
TCGACTGGAT CGCACTACGT GGAATGTGTT CTGCTTGGTA AAGAAGGCGA AAAGACGGCA 
CCTTTCAAGA TGCTTGGAGT GTAAGTCCAT CATCTTTTTT CTTCTTCTTT TTCGTCTTCG 
TGATGGGGGC AGAGCTAATC AACGACTGTA GCTTTGGGAC CTAGAAAAAC CCCTGCTTCC 
TTTCCCTCAG TTGACATTGA TCGAGGAAGA GTTTTACGTC GTTCATTCCG CATGGTTTTT 
ATAGAGTTTC TCGTTTTGGT GATGCAACAA CA 

 

Protein sequence

MLREAKVGLD TPSSAPRAFS GVSRRIWLLV AVVLGIFTFS RLLFPAHDPL SSLGVGLLTS 
KDYLNASATD PAPFEFCPVF GPGDEVAARR GQWGLLRSRL HMGSGARVQR VVQKAMAGLP 
VTISVLGGSV SACHGAGNDP VSPGCYPAQF FDWWNSVFPH PSSELTNGAS RRTDSAYFAY 
CSTHHLPDQT DLVILEFDAS DPNDPEWLAH FELLVRSILV RPDQPAVIVL GHFSPQIQAQ 
NGFAGPELLH TVVAQFYDVP HISAKGVLYG DYLAEPEAAR NTFFTDPILA NPTGHGVIAD 
VLISYMQSQI CAGWAATMGH AFDVPYMGAP ALEDNLAGAG IQSEEDLESE GGGLAAKLRA 
IKVPQAMLSD RPSDILKFRE VAPFCVSAND LVNPLPPSHF YGSGWHAYHP SKGASDDEKH 
YWYSDIGGSK MRVPVTLSAG DVAIYYLQSP AENPLGRAAC WVDDNFASAV ELSGVSDVQE 
ATPTLTLIDE NVSTGSHYVE CVLLGKEGEK TAPFKMLGVF GT