| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC04930 |
|---|
| Symbol | |
|---|
| ID | 3256376 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006685 |
|---|
| Strand | - |
|---|
| Start bp | 1489070 |
|---|
| End bp | 1490946 |
|---|
| Gene Length | 1877 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | 638255712 |
|---|
| Product | cytoplasm protein, putative |
|---|
| Protein accession | XP_569779 |
|---|
| Protein GI | 58265246 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0012] Predicted GTPase, probable translation factor |
|---|
| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.363977 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATCCGAAAAG AGGTGCATGT CATCTCGCCT CCTTGTAACA TCACTCGGAC CAACAAGATC
GTCGCTTTTA TTCAACGCCT CGACCGCTGT TGTATTCTCT CTCAAGCCAG TAACTCTTAC
TTCGTTCCCA CAAGTTCCCC TTAAACCTTT CTCTACATCT TTCGCTCCTT GCGCAAAGTT
AAAAAAGATG GCCCCCAAGA AGAAGGTCGT CGAGGAAAAG AAAATCAGGC TTGGCCGACC
TGGTAACAAC TTGAAGGTGA ATTCATATTA TGTGGTTGAG TGATTAAATT GGAAACAAAA
TACTGATCGG CTCTTACTCA GGTCGGTATT GTCGGTTTGC CCAACGTCGG CAAGTCCTCT
TTCTTTAACA CTCTTTCCCA AACAGATCTG GGTAAAGCCG CCAATTTCCC TTATGCTACC
ATGTAGGTGT TGGATTCTGA CACCAAACTG CTTCAGCTAA CTGATTCCAG CGATCCTGAA
GAGGCCCGTA TTCCCGTCCC TGACGAGCGA TTTGACTGGC TTTGCTCTGT TTACAAGCCT
GCAAGCAAGG TTCCTGCCTT CCTCACTTGT ATTGATATTG CTGGTTTGAC CGCTGGTGCC
TCAACCGGTG CAGGTCTTGG TAATGCCTTC TTGTCCCACG TCCGAGCCGT CGATGGTATT
TTCCAGGTGG TCAGAGCATT TGATGATGCC GAAGTTATTC ACGTCGAGGG TGACGTTGAT
CCTCTTCGTG ACATGCAAAT CATCAGTACC GAGTTAAGGT TGAAGGACAT TGAATGGGTA
GAGAAGGAAT TGGATAGGTT GAAGAAATCT AGCAAGAACT TGGGTAGCGT CAGTCTCGCT
GACAAGGCCA GAAAGGAGGA AATGGTAACA GTGTTTTCAA CGCTTTCAGA GCAACACAGC
TGACTCTTTA ATGTAGGCGA CTGTTGAGAA GATCTTGCAC ACCTTGGTCG ACGAGAATAA
AGATGTTCGA AAAGGTACCT GGACTAGTAA GGAAGTAAGT CATGTTCATA TTTTCCGTTC
ATCCCTTCTT TCATCCACTT TTCCCCTTTG CGTGATGAAA CAGAGCCTAA AGCTCTTTAA
ACCCAGCTCA TCGATGAGGA GTAACGCCCA ATAAACAAAT GAGAGAATAT CTTTTCCTGA
CTCTTTTCTA TCTTCATTAT ATCTATTTGT ATGGCTTCCC AGCACGTGCT AACAGCTGTT
GTTGTCAGGT TGAGGTAATC AACGGTCTTA CTCTTCTTAC ATCCAAGCCC ATCACCTATC
TTGTGAATCT CTCTGAGCGA GACTTTATCC GCAAGAAGAA CAAGTGGCTT CCCAAGATCA
AGGCTTGGAT TGACGAGAAC AACCCCGGAG ATGCTCTCAT TCCTTTTTCA GTTGCCCTTG
AAGAGCGACT TGTCTCCATG TCTGATGAGG AAAAGGCTGC TGAGGGTGAA GCATTGGGCT
TGGGTCCCAA GAATCCCAGT GCTTTGGGGA AGATCACAAC TTCTGGTTAC TCCAGTCTTG
ATTTGATCCG ATATTTCACT TGCGGTCCTG ACGAGGTCCG GGCATGGACC GTTCGAAAGG
GTATCAAGGC CCCCCAAGCC GCTGGTGTCA TTCAGTAAGT AACTCCTGTC AGACTTACGG
GGTAAAAGCT CATTGCTGTC AACAGCTCCG ACTTCGAGAA CAAATTTGTT TGTGGTGAAA
TTATGTCTTA CGATGACTTG AAGGAATACG GCACTGAAGC GGCTGTCAAG GCTGCTGGTA
AGCTGAGGCA GCAAGGTAAG CCTTACGAGA TCGTCGACGG TGACATCTGT TACTGGAAGT
CTGGTGCTTA GAGTAGAGAA TGCATAATGT GTAGCAGTAT CATATGTATA ATGAAGAAAT
GAAGATTGTA TGACTCG
|
|---|
| Protein sequence | MSSRLLVTSL GPTRSSLLFN ASTAVVFSLK PVTLTSFPQV PLKPFSTSFA PCAKLKKMAP
KKKVVEEKKI RLGRPGNNLK VGIVGLPNVG KSSFFNTLSQ TDLGKAANFP YATIDPEEAR
IPVPDERFDW LCSVYKPASK VPAFLTCIDI AGLTAGASTG AGLGNAFLSH VRAVDGIFQV
VRAFDDAEVI HVEGDVDPLR DMQIISTELR LKDIEWVEKE LDRLKKSSKN LGSVSLADKA
RKEEMATVEK ILHTLVDENK DVRKGTWTSK EVEVINGLTL LTSKPITYLV NLSERDFIRK
KNKWLPKIKA WIDENNPGDA LIPFSVALEE RLVSMSDEEK AAEGEALGLG PKNPSALGKI
TTSGYSSLDL IRYFTCGPDE VRAWTVRKGI KAPQAAGVIH SDFENKFVCG EIMSYDDLKE
YGTEAAVKAA GKLRQQGKPY EIVDGDICYW KSGA
|
|---|
| |