Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNC04560 |
Symbol | |
ID | 3256670 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006685 |
Strand | - |
Start bp | 1380151 |
End bp | 1382059 |
Gene Length | 1909 bp |
Protein Length | 427 aa |
Translation table | |
GC content | 47% |
IMG OID | 638255676 |
Product | conserved hypothetical protein |
Protein accession | XP_569706 |
Protein GI | 58265100 |
COG category | [C] Energy production and conversion |
COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.186875 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GCAAAACCAT CCCCCAAATT CTATCTCTTC GCAAACCGCC CATACTCGTT GCCCTTGAAT ACACCTTCAG CTGATCTACC TTCCAAGAAG CTTCGATAAA TATTCTAATC GTCATAACAA AACATGTCTT CGCAACCATC CAACATTGTC ATCATCGGAG GTAAGTTATG GCACAAGATA TTTGGAACAG ACTGACCAGA TTATATGTAG CCTCTGTGGC TGGGCATAAC CTCGCCAATT CCCTTTATCC TACACTGCCG TCTACCCATC GTATCTTGCT TATTGACGCA CTCGATTACG GTTTCTTCCC CATCGCATGT CTCCGTGCTG CCGTCGTTCC TGGTGAATTA TTTTCCCATG CATAATGAGG CCGAAAAGAT GTTAATAACT ACACTAGGCT GGGAAGATAA GGTCACGGTA CCGCTTACCA CCAAGACCGT TTTCCCTTCT GGTACTGCCC ATCAGGTCAT CGCCCTTAAC AAAGTCATTG AGCTGCGCGA GAACTCTGTG GTCTTAGAGA AGCCTTTCGA AGGCTCCACA GAAGTCCCAT TCTTCGTAAG TTGCGGTTAA TAACTGTCTA TATCTCTTCC TGATTTTTAT TACGACAGCG CTGTGTCATT GCTACTGGAG CCTCTCAGCC CTCCCCAATG AGACCACCCC CAGGCGCCAC CAGCCAGAAA CAGTTCATTG ATAATCTCCG ACATATTCAA AGCGACATAT CCAGGGCTAA GAAAGTCGTG ATCATCGGAG GTGGTACAGT CGGCATTGAA TTCGCGGGAG TGAGTTGGTC AACGTATGCG GAATAAGCCA GATTCTAATT GCCTTTGCAA CATCCACAGG AAGTTCGAGA CGCCCATCCT GATACCGAAG TTACGATCAT CCATTCCAAA CCTTCCCTTT TATCTCCGAT CCCATCTGCA GGCCCTGAAT CCTCTTCCAA TCTGAGTTGG TCCTCTCCTC CCACCAATCC CAAACTCTCT AAGAGTCTAG AGCAGGTTCT TAAAAACCTC AACGTCAACC TGATCCTTGA TGATAGTGTC TATATCCCAG TGGGAGATAA TGCATCAGTC GCGGGCGAAT GGGATGGGTC ATTCGGCCTC CAGGATGAAG TGAAGAAGCT CAAGTTGCGA AGTGGAAAGG AGGTGCAAGG TGATTATATC TTTGTGAGCG TTGGCAATAA TCCAAACATT GGGCTGGTGG CGAGCGTGGA CCCGGCCGCA ATAACTAGCG GATTGGTAGC AGTTGACGAT TATCTGAAGG TTAATATTTT CATGTGCTTT CCGAACTTGA TGTGGACTGA CGAAGTGTCA ATAGGTTGCA TCCGACAACC CAGCCTCTCT TCTCACGAAG AATAGTAACT ACTATGCTGT CGGCGATGCT TCCGCTGTTA CAGGGTTGAA AACGGCATGG CTTGCCCGTG TCGCCGCGAC GCATGTTGCT AAGAAGTGAG TCTGGAACAA AGCCGGGGCC GACCATTTAG ATGAATCTTT GGATTGTTGA CGATTCGTTG ACTAGCATTA TCAATGAGGT CAAAGGCAAA GAGCTTTTGA AGTACTCACC TGGAAGTTTC AATGCCTTGG TATGTTCTTC TCATATATGA CGAAACGGCT TTCTTGAGTC TAATGTTCCT TCAGTTTGTC CCTATAGGTC CAACACATGG CGCCGGCTCC ATCACATTCC CTTTCTTGGG TACCTGGATT GTTGGTGGGG GCGTGGTTAA GGCAGCCAAG GGGAAGGATT TACTCATCGG CCAGGTCTGG CAGCCTCTCT GGCAAGGGAG TGATAAGGTT GACTTGAAGG TGTGAAATGT GTAGGTCGAT TCACTTCTTG ATTAATTAAA GGCTCCTGTT TCTGTATGGC ATTTATAACC TATAGCCTAT ATGGGATTTC TGTTTTGTTG AATTATGTA
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Protein sequence | MSSQPSNIVI IGASVAGHNL ANSLYPTLPS THRILLIDAL DYGFFPIACL RAAVVPGWED KVTVPLTTKT VFPSGTAHQV IALNKVIELR ENSVVLEKPF EGSTEVPFFR CVIATGASQP SPMRPPPGAT SQKQFIDNLR HIQSDISRAK KVVIIGGGTV GIEFAGEVRD AHPDTEVTII HSKPSLLSPI PSAGPESSSN LSWSSPPTNP KLSKSLEQVL KNLNVNLILD DSVYIPVGDN ASVAGEWDGS FGLQDEVKKL KLRSGKEVQG DYIFVSVGNN PNIGLVASVD PAAITSGLVA VDDYLKVASD NPASLLTKNS NYYAVGDASA VTGLKTAWLA RVAATHVAKN IINEVKGKEL LKYSPGSFNA LFVPIGPTHG AGSITFPFLG TWIVGGGVVK AAKGKDLLIG QVWQPLWQGS DKVDLKV
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