Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNC04060 |
Symbol | |
ID | 3256171 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006685 |
Strand | - |
Start bp | 1253735 |
End bp | 1255299 |
Gene Length | 1565 bp |
Protein Length | 406 aa |
Translation table | |
GC content | 56% |
IMG OID | 638255627 |
Product | expressed protein |
Protein accession | XP_569645 |
Protein GI | 58264978 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATTGGTCTTA TTTCATTTCC CCGCGTGCAC CATTTCACCT TCTCCCTCTC CTCTTTCAAA TTGATAATAA CATCACACAC CATCCTTGCG TCAGTCACCA CCGGCCCAGA TCAGATTAGA TACCACCATG TCAGAGGCAG GTTCAGCGTC CACGCCCCAG TCAAACGCAA CAAAAGTACG CACAATCCCA CACGTTTTCC CATCCGCATC CTGACCCCCT CGCAGGACCG CCACGAGCCC AGAGGCCGCA AGCCAAATGA CCAGCTTCCC CCATCCCGCG CACGCGAGGT CCAGCGCGCC TTCCGTCTCC GTCGTGCAGA GCATCTCGCC TCGCTCGAAG AACGCATCCT CCAGCTAGAG ACGGAAAACA CCCAGCTGCG CGCACTCCTC AGTCTTCCCG CAGCAGACAG GCCAAAGATC GGCTCAGGGC CCACCGGGCG CGGCAAGGCC CTCAAGGAGG GTGGTGTCCC CATGAGCGAG AGAGTCCGCG CAAGAAAAGA AGCGAGGGAG AGGGAGAGGA GAGCCTTGGG GCTGCCAGAA GCTGACACCA CAGACATGAG CGAGGCCGAG AGAGGAAACG GCAGGGACAG CGCGACACTG TCCCCTCGTG CGACAAGCGG CGCCGGTCCA TCCAATGCCA CTGCTGCCGC CCACACCGCG CAGCAGCAAC CCAACGTTCC TCACCTGAGC AACCCTCAGA ACGTTCCTGC TCTTTTCAAC TCTCCCGCCG ATGTCTCTCC CGCCCCATTC AATTACCAGC TCCCCATGCC CTTCAACCTC CCCGTGTCTC CCGATACACA GTTCGCTGAT TTCACCAACA ACATTGACAA TTCTCTCTAC AAGAACAACA CCACTTCTGC TACACCCAAC TTTGGCGGCA TGTTCAGCAT GTTCTCATCC GCGGATCATA ATGGCGACAG CAGCGCCAAT GGCTCCGGTG TTAATAAACC TTCTCCCATT TCTCCACCCT TGACCAATCC TCCCCATGCC CCATCTCCTT CTCAACTCGA CCTTCTCACC CGTCTCAAGA GCTGCTGCCA TGTCTCAGAT TCTCATGTCG TCAATGACCC CGGCCTTTTG GTCTTTGCCA CGCGTCTCTG TCAGTCATTC GGTTGTTCGT TCGGTGGCAC GCACACGGAA GCCAATCCTC GGAGCGATGC TGAAAACCTT ACCCTCGAAG ATGCATGGCA CGCTCTCAAG GCGACTCTAG ATCCCGGAGG CGACGCTGAC GGGGAAAATA GGATCAATAC TGGCAAGATG GCAGCAGAGT TGGTGGTCCG TGCGGCTCAT TCGCGTGGTG CCGGCGGCTG GATCTCGTGC AGGTACCGTG AAGGGCTGTC AATAAGAAGG AACATGGTGC AGGCATTAGT GCAAGGTTTG GGAGGAAAGC TCGATTGAGT GTCTGGGTAA AAGTGGGATG CGTTGTCTTG TCGGAAGTTG TACTGTTAAT CTAGCATATA TACATGTCTT CAACGATAGA GTATATTGTG CCTTGTAGGG GCGTTTGATC TTAGTCGTGG ACTTTCTACC ACCAGTATGA TTTTGGCTGT TTGTACGATA TGCGG
|
Protein sequence | MSEAGSASTP QSNATKDRHE PRGRKPNDQL PPSRAREVQR AFRLRRAEHL ASLEERILQL ETENTQLRAL LSLPAADRPK IGSGPTGRGK ALKEGGVPMS ERVRARKEAR ERERRALGLP EADTTDMSEA ERGNGRDSAT LSPRATSGAG PSNATAAAHT AQQQPNVPHL SNPQNVPALF NSPADVSPAP FNYQLPMPFN LPVSPDTQFA DFTNNIDNSL YKNNTTSATP NFGGMFSMFS SADHNGDSSA NGSGVNKPSP ISPPLTNPPH APSPSQLDLL TRLKSCCHVS DSHVVNDPGL LVFATRLCQS FGCSFGGTHT EANPRSDAEN LTLEDAWHAL KATLDPGGDA DGENRINTGK MAAELVVRAA HSRGAGGWIS CRYREGLSIR RNMVQALVQG LGGKLD
|
| |