Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNC03360 |
Symbol | |
ID | 3256570 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006685 |
Strand | - |
Start bp | 1068296 |
End bp | 1070039 |
Gene Length | 1744 bp |
Protein Length | 444 aa |
Translation table | |
GC content | 49% |
IMG OID | 638255559 |
Product | hypothetical protein |
Protein accession | XP_569664 |
Protein GI | 58265016 |
COG category | [K] Transcription |
COG ID | [COG5601] General negative regulator of transcription subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.80106 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CGTACTGTTC TCTACTTTCA TCTCGCCTTC TTCCTAACAG CATTCCTTCT CGTCCCACCA CTGCAGTGGA ACGTTACTCC AACTAACATG TTCTACGCGA CAGCAGGCCA GCAAGCAACT CAGCAACCAC CAACATCAAG AATCGCAGGC TATCCAAGAA ACGGTCCTCC GGGGTTTAGC GTTCGAAGCT CTGGTGAGTA TTTCAAAAAG AGACAAGCAG TCATGTCATG TAAGAATAGG AGTAGATGTT GATTAATGAT AGATCCAAAC GATTTTCCTG CTCTTGGATC ACACAATCAG CACAATTCGA GCTACATCGC TCAAAATCAA GGCGGCCAGA GTTCAGCCAA CGCAAGCCAT CAGAACTCAC AATTACAACA ACAACAGCAC CTGTATATGC AACAGCAGCA ACAACAACAG CAGCAACAGC TTGGTGTCAC CCCTGCACCT CCGCCGGGAA TATCTGGTCC AACGGCGAGC GCTCCGTCCC AATCGAATGG AGGTTTGACA GAAGAGTTTC CTGCTCTCGG AGCATCCTCA GAAAGCAAGG ACGGTCGTGT TAGTGTTCAG TGGATGACGA TGATGGCTTT AACTAACAAG TTATGGATAG ATGGCCAACT TTTTTCGGAA TCCGTCTAGC GTACATCAAC CCATCCCTTC CTCCCCTTCA CCATTACCCA ACGGTACAAG CAATGCAAGT GCATCTCAAT CCGCAGATGC GACTCCTTCA ACCAATCCAC CTCACCCTCA ATCAGGGATA GGCGGGCCAG CATCTACAAC TGATTCATGG CAACGACAGT CACCAAGACA TACAGAACCT GTGGTACGGC CAGTACAGCA GATCCTGAGT TCCCCGGTGG ATAGATGGGG TTTGAAGGCG CTGTTGTTTG AGATCCAAAT GCATATGAAC AAGACGGATC GCGGCATGAT GGTGTTTGGA GAAGATTTGG AGGAACTGGG TGTGGACATA AACAGCGAGG AGTAAGCCCA GGAACATTTC ACTTTCGAGC TTTTACTGAC GAATCTGCCC AGAGCGCTCT ATCCTACATT TGTCACCCCA TGGGCAGAGC CCAACTCATT ACCGCCACCT CAAATTGAGG AATCATTCCA CATTCCTCAG TGCTATTACG TCCATGCGCC TCCTGTAGAG TCCAAATTGC AAAACTTCGC GGAAGATACT CTTTTCCTTG CTTTTTATAT GTCTCCTCAA GATGTTTTGC AGCTCCGGGT CGCGGAGGAA CTGTAAGTAT GCTCGTAGTG TACCAGCTGT GCCTAATACA AGTTCAGGTA TGCCCGAGGA TGGCGTTATC ACACAGAATT ACAAACATGG CTTACCTCTC CTACTCTCGC AAGCATCGAT CTCTCCAAAG CCGATCGTTC CAGTGGGCAA CCAAACTGGA TCCGTGGTCC ATTCGCATAC CTCGATACCC GAACATGGGT TAGGCAAAGA ACGGCGGAAG ACTTTACCAT CGACGCCAAC GTTCTCGAAC TTACCAAGCT GGCGGATGAT GTCATTCGAG AGGAGGCGGC CAGAAAGGAG GCGCAGAAAA GCCCTGGTGG TGTCCCCGTG AATGGTCAAA ATCAGGCTCA AAGCCAAGGC CAACAAAATC AAGGACAGGC GCTTTCGTAT CAACGATGAC CTGCTTAGGA GGAGATATAC ATGGAGAACG ACGATTCATG TTTCATGCCA TCGACTGAAC ATTCTCAATT TTAGAAGGAT GTTGTGCACA CTGCGGAACT GACC
|
Protein sequence | MFYATAGQQA TQQPPTSRIA GYPRNGPPGF SVRSSDPNDF PALGSHNQHN SSYIAQNQGG QSSANASHQN SQLQQQQHLY MQQQQQQQQQ QLGVTPAPPP GISGPTASAP SQSNGGLTEE FPALGASSES KDGRMANFFR NPSSVHQPIP SSPSPLPNGT SNASASQSAD ATPSTNPPHP QSGIGGPAST TDSWQRQSPR HTEPVVRPVQ QILSSPVDRW GLKALLFEIQ MHMNKTDRGM MVFGEDLEEL GVDINSEEAL YPTFVTPWAE PNSLPPPQIE ESFHIPQCYY VHAPPVESKL QNFAEDTLFL AFYMSPQDVL QLRVAEELYA RGWRYHTELQ TWLTSPTLAS IDLSKADRSS GQPNWIRGPF AYLDTRTWVR QRTAEDFTID ANVLELTKLA DDVIREEAAR KEAQKSPGGV PVNGQNQAQS QGQQNQGQAL SYQR
|
| |