Gene CNC03090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC03090 
Symbol 
ID3256642 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp980440 
End bp981659 
Gene Length1220 bp 
Protein Length226 aa 
Translation table 
GC content46% 
IMG OID638255532 
Productexpressed protein 
Protein accessionXP_569942 
Protein GI58265572 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.379491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGTCCACAAC TATCTTCCGT CCACGGTACT GATACAAAAA CTACCCCTCC TCGTCTTCTA 
TCTACCAAGC AGTCACTGCT TCCCCTACTT GTTCATAATG CCTTCTATTG CTGGCAAACT
AGTTAACAAG GTTCTTAAGG ACCATATAAG TAAACAAGCA CCGGAGGATC CACTTTACAC
AGTAACAGTG AATTCAAAAG GCAAATCAAA GAGGCAGGTT GTAAGTCTAC CATACAACGC
AGTGCAGCCC GGAGAGGCGG TAGGTACCTT TTTTGAAAAT ACACTAATAC AGGGCTCGTC
TATTGCTAGA GGCCTCTCCC AGAAGGGCTA TCCAAGCGCG ACAGAAAAGC GTTAAAGAAA
ATAAGAAAAC GTGCTCATTA TCTGGACAAA GGCATGAATA TATGTGGTTT CAGGGTGGGC
TGGACTTTCT TCATCGGCGA GTCATGCTCT TGCTGCATAT CATTCATCGA GCTGACCTAT
GTTTCGTAAC CAGGCATCAT ACCTGGATTG GGTGATGCGG TCGATGCTGG CCTTAACTAC
TGTCTCGTTG TCAAGCCTGC CAAAAAGCTT GATATACCTG ATAGTCTAGT ACACAAGATG
TTGTTCAATA ACGCCATTTC TGCGGGTCTT GGGTAGGTAA CAATACCATG ACTCATACAT
TGAAGACCCC CGTGTTCAAC TTGCCTTATT CTAGACTGGT CCCCATAGCC GGAGACATAT
TCCTAGCTGC CTGGAAAGCC AACTCAAGAA ACGCGGCACT GTACGTTTCG TAATGTAATA
TGGCAAGGAA TCTCGCTGAT CATTGTCACA TCTTCTATCT TCTTCCGGTA TCGTATGAAA
ACTACTATTC TTCATTCCTG CGAATCAAAC ACTGCCTGGC TTTGCGCGCG CTAGTTTGGA
AGCCTATTTG ACCATCAGGG GACAAGAATA CATTGCGGCA TTACGGCGAG AACCCGGTGT
AATTGATCCA GCAGAGGCTA TCGCGCACGG TGTGCCACCG GAAGATCTGA GAGATCAATT
CGGACCAGGA GCGGGAATGG ATCATCCAGT AGAGGATGAG GAGAGTAACC GAGGCTTTTT
TGGTGGGAGG AAAAGCAAAA AAGAAGTAAC CAAGAAGTAA CAGCCCCTCG TAACCTTGGC
ACCGCCTTCT TATCATTTAT TCCGCACTTG ATACACGATT TATATGCCAT ATCGTTACGT
TTATGTAACG TTTTGCTACA
 
Protein sequence
MPSIAGKLVN KVLKDHISKQ APEDPLYTVT VNSKGKSKRQ VRPLPEGLSK RDRKALKKIR 
KRAHYLDKGM NICGFRVGWT FFIGIIPGLG DAVDAGLNYC LVVKPAKKLD IPDSLVHKML
FNNAISAGLG LVPIAGDIFL AAWKANSRNA ALLEAYLTIR GQEYIAALRR EPGVIDPAEA
IAHGVPPEDL RDQFGPGAGM DHPVEDEESN RGFFGGRKSK KEVTKK