Gene CNC02140 details

Gene Information

• Locus tag: CNC02140
• ID: 3256606
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006685
• Strand: +
• Start bp: 603695
• End bp: 607033
• Gene Length: 3339 bp
• Protein Length: 1065 aa
• GC content: 54%
• IMG OID: 638255435
• Product: hypothetical protein
• Protein accession: XP_569483
• Protein GI: 58264654

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.271772
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GCCAGCAGCG TGGACTAGGA TGGCCTCGGT AAAGGCTCTG CTGCGGACAC CCGCCTACAA 
CCCCCTCCCG CTTCCGACCC TCCCGTCCCC CGAGCCGCAC GGCCGAGACG CCGAGCAGCT 
CCCACCGCTC GCAGAAAGGT ACGCGCTCGT CGCCCACGCT GACAACCGTG GCTTACCTTC 
TCTTGCCAGC CTTGTTCTCC CATACTCCTT GATACAGACA CGCCACCACC ACCTCACATC 
CCTCCTCCCC CTCGCATTCT CCCACCCGCC CATACCGTCT CATAATAAGC CTAGGGCAAA 
GCCCTTGCCA AAAGGCGTCT TTGTGTTCCC GACCCCGCCG CCTCCCGTTC ATCCCCTCCC 
AACTAGAGAA TATCACGGGC CCAGAGATCT GCTCAATGAG GCCTCTCCTT CTGCAACGCC 
TCCTGCCAAC CCAGCATCGA CACCTGTCCC ACCGCAACCC AAGGGGCGCA AGCGTTCAGG 
TGAACCTGAA CCTCCAGCCC ATGAGATCGA GTGCATCGCG CGTGTGACAT TGGCTCTGGG 
CCCAATGTCT TTCCACGGCA CAGAGCTATG GGTCGGGCGC TTTGTGGAGC CCAGAGCTAA 
TAAGCCCAAG AAGGAAAGAG CCAAACCAGG CGAGCGAAGG GAGAGGGAAA AAAAGAGGCG 
AGAAGGGATA GAAAAGGAAC GACAGAGAAC ACATTCAGGT CCGAGTGCTA CACCTAAACC 
CGCCGCTTCG GTGGCAAGGC CAACAGTCGC CACTGCTGGG CCGTCCGCTC CTCGCATGCG 
GCCCCCAGCA CCGGGACCGG CCGTGACAAA CCGCACAGCG GCTTCGCCCC AACTCATCCA 
ACTCGTTAAT CAGGCTGCCT CTCGTCACCC ATGGCTTTCA TCTCTTATCT ACAAAGCGGC 
GGGTAGCACA GCCAACCAAG ACGAGTTGGA AAGATTAGGG AGAGCAGTGG CAAGGCTCAG 
CAAAGGAGAA GCAATCGACG ATCTAGCACC GCAGCGTGTG AACATTGCTT CTAGTGAGGT 
TTTGAAAGGG AAAGGAAAGG AGACTGCTGC AAGTACTTCT CACGCTTCAA AGACGTCTGT 
TCCCGCAGTT CCAGGGCCAT CAAGTCTATC AGAAAAGCCC ACATCTGCTC CTGCTCCCTT 
GCTTTCTCAA AATACTTCCT CGTCAACTCT TACACCCGTC GTACCGGCTG AAAAAGACAA 
GGAAGACAAG AAGGATGATG CAGAATCTGA TTGGGACAGT GAAGTTGAGA TGAAAGGTCC 
TAAACAGGTC GGAGGAGGCC CCATCGGCCC TTCCACTCTC GATTCTGCGG CCGCAGCATC 
CACCATACCG TTGACATCTA CCGCTACTCA ACCTTCCTAT GCACCCAGCT CCGTGCCCGC 
TTCCCAGGCG GCCAATCCTT CAGTCCCTTC TCCTGTCCCT GGGATTGTCC CCTCTCCTAT 
CCCTGTGTCA GCATCAACAT CTTCTGCAGT GCCATTGTCC CCGCATGCGC CGCCTCCTAA 
ACCTAACCTC CCTAATCCAC CGCCATTCTT GTTGATTGCA TTCAAAGAGC ATCCCACAGA 
CAAATTCTTA ATCCCCTTGG GATCAAGGAG TTTTGTCAGC CGTGTTGGCG GGGATTGGGT 
TACTAGCAAA CCTCCCCATC TTGCTCCCGA CACTACGCTG CCTTTGGGCC AATCCCTGGA 
AACCAGTGGC AATACAAATC CAACAGTGGC TCCACAGCCA GCAGCCCAGG CGGCCATCTC 
CAGAGAACTG CAAGCTTTAC AGTCTTCTGC AAAATCGTCT TCTTTTGAGC TAGAGGCTCA 
GTCACACTCA AAACGCAGAG GACGTACCCA TGTTCGCCCA ACCAATGCCA ATTCCCCCTC 
TCCGGCACCA CCCAAAGTCA AGACCAAGCC CATCGAAGAA CCCAGCTTGA CAACAACAAC 
AACAACACCA GAGTTTCCGC CTCTTCCTCA ACTTCCCGGT CAAAATCCTC CCCCTGGAAC 
AGTCCTCATC TCTACTCTTG TGCCGGCTAA TAAATGGAAC AAGGTTGACT GGGCGTCATT 
GGGCAAAAAA GTACCTTGGT CTGAGGACTG GAACAGTAAA GTCAAAGCTG GGACGAATGA 
AAATGTCAGA GAGGAGGAGC CTTTGCCATT ACCTTTGTCA GATGCCTCAT CCCAGAACCA 
CGTCCAGTTA CTTAATCTTG CTGCTGAAGA CTTCCTCCCT GAAAATGGAC CTCTGAAAGC 
AATCACGATC AGGTTGGGCC AAGTGGACGA TCAGATCTGG GGGAGAATGA AAGACGTGAT 
GACCTTGGTC GACCGGGCGG AGATCATGGC CTTGTCGGCG ATGGGCGTCT TGCCGCCTGC 
TCCAGACTCT ATAACCCACC CTGCCGACGA CCCAGAGATC AGAGAAGCAT ACCTCTTGCA 
CAAAACGTCC CTCTTTTCAT CTCTCATGGG CCGCACTCGA CAACCCCGTC GTTTCTTACA 
CACCCGTCCG TCTTCTCCGC CTGCTGCTCT TGTAGATGCA ACAGTAGATA AAATGGCTCC 
GCGTCCCTAT CCCATATCTA CCAAACCGCT GTATCATGTC GAAGAGGGTG ACAACGAAAT 
GGAGGGGCGA CGGGATAGCG TGAGGCAATG GTCGCCAGAT GTAGAATTCG ATGACGGTCT 
CGGGAGAAGG AAGAAGAAGA AGACAGCTCA AGAAACGGTA GGATTCGAAA TGCCCGTCTC 
GTTGGAAGCG CTTGATGAGC GGGTGGAGGC CAGTGCTCAA AAAGCACTTT TGGGAAAGCG 
CGGAAGAGCC GGTGGAGGAG AAGGAGCAAG GAAAGAAAAG CAAAGGCGGG GAATTGAAAA 
AGGAATATGC GAAGGCTGCG CAAGAGAGGG AATTAAGATT TGGAGAAGAG GACCGAGTGG 
AAAAGGAACA TGTACGTCTG GTGTCATTGG AGTTCATGTT TGTTAAAAAA TGGATGAGCC 
TTACTGACGT TTACGGTTCC AGTGTGTAAT TCATGTGGCG ATCTTTTCAC TGAGGGGAAA 
CTGCAATACA GTGACTTGAA GGCCCCTGGA GCAATGAAAA CTCTGTTGGC TGCCAACCAG 
GACGTCAGCG GAGCGGACGC CATGCATAAT CAGGTGGAAG AAAAGAATGA CAGTGTGCCT 
GTCAAGGCCG AGCAAGGTCG TACGACCGAA GAGGCTCTCG GGGACGGCAC AGCCATCAAT 
TCGGAAGAAC AGAAAGAAAC ATCTACCCAG GTCGTGCAAG CTGAGAGACC ACCAGAACAT 
TCGCCACAGC ATCATGCTGT CGAGAGTCAA CCTGCAACGC AAAGCTTGCC AGAAACGATA 
GAACCAGGGG TGGACATGCA GAATCAAAAG AGTTTGTAA 

 

Protein sequence

MASVKALLRT PAYNPLPLPT LPSPEPHGRD AEQLPPLAES LVLPYSLIQT RHHHLTSLLP 
LAFSHPPIPS HNKPRAKPLP KGVFVFPTPP PPVHPLPTRE YHGPRDLLNE ASPSATPPAN 
PASTPVPPQP KGRKRSGEPE PPAHEIECIA RVTLALGPMS FHGTELWVGR FVEPRANKPK 
KERAKPGERR EREKKRREGI EKERQRTHSG PSATPKPAAS VARPTVATAG PSAPRMRPPA 
PGPAVTNRTA ASPQLIQLVN QAASRHPWLS SLIYKAAGST ANQDELERLG RAVARLSKGE 
AIDDLAPQRV NIASSEVLKG KGKETAASTS HASKTSVPAV PGPSSLSEKP TSAPAPLLSQ 
NTSSSTLTPV VPAEKDKEDK KDDAESDWDS EVEMKGPKQV GGGPIGPSTL DSAAAASTIP 
LTSTATQPSY APSSVPASQA ANPSVPSPVP GIVPSPIPVS ASTSSAVPLS PHAPPPKPNL 
PNPPPFLLIA FKEHPTDKFL IPLGSRSFVS RVGGDWVTSK PPHLAPDTTL PLGQSLETSG 
NTNPTVAPQP AAQAAISREL QALQSSAKSS SFELEAQSHS KRRGRTHVRP TNANSPSPAP 
PKVKTKPIEE PSLTTTTTTP EFPPLPQLPG QNPPPGTVLI STLVPANKWN KVDWASLGKK 
VPWSEDWNSK VKAGTNENVR EEEPLPLPLS DASSQNHVQL LNLAAEDFLP ENGPLKAITI 
RLGQVDDQIW GRMKDVMTLV DRAEIMALSA MGVLPPAPDS ITHPADDPEI REAYLLHKTS 
LFSSLMGRTR QPRRFLHTRP SSPPAALVDA TVDKMAPRPY PISTKPLYHV EEGDNEMEGR 
RDSVRQWSPD VEFDDGLGRR KKKKTAQETV GFEMPVSLEA LDERVEASAQ KALLGKRGRA 
GGGEGARKEK QRRGIEKGIC EGCAREGIKI WRRGPSGKGT LCNSCGDLFT EGKLQYSDLK 
APGAMKTLLA ANQDVSGADA MHNQVEEKND SVPVKAEQGR TTEEALGDGT AINSEEQKET 
STQVVQAERP PEHSPQHHAV ESQPATQSLP ETIEPGVDMQ NQKSL