Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNC02050 |
Symbol | |
ID | 3256698 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006685 |
Strand | - |
Start bp | 573734 |
End bp | 576428 |
Gene Length | 2695 bp |
Protein Length | 694 aa |
Translation table | |
GC content | 49% |
IMG OID | 638255427 |
Product | expressed protein |
Protein accession | XP_569972 |
Protein GI | 58265632 |
COG category | [S] Function unknown |
COG ID | [COG0398] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.396797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TGAAAAATCA TCTCCATCTC TCTTTCACGT TCCCGAGAGC TTAGTGAGCC CTCTTGCAGT GCTCTCCACT TCGGTCATCT CCCCCCTCCA AGCATGCGCC ATCGCTTCTA TCTGCCTACA ATCGTCAGGG ACCAAACCTT TCTCTCCTTC GTCCGCCAAC GCCACCATTC TCACCATCAT CCATACCTCA CTCCATCATT ACCATCCCTT ACCCCTAAGC ATGAGCCGGA CCTTTCCTCA GACGCACCAC CAGGTTCCTC TTCTGCTGCC TCGGAGAAGG ATATTACTTC TGTTCTGTCA CTATTAAGAG AAGACTATGT GGCTGTAAAG GAACATATAA AGGTCATGGA CTATAAGCAA GTGTTGAAAA GAGCTGCGCA AAGACACATG TATAGTGAGT ACATCCCATC CTAATTTCAA AAGTCTGTTT AAAGAACTCA CAAGTGCAGA GTGGTATGCC ATCTTGATAA TAGCAGGTAC CCTGACCGCC CTGATCACGG CTAAGCATGA TGCGGTCGTC GACTTCTGTA GGCCTATAAC AGAGAAGATC AGAAGCTGGC CGGCCGGATG GCTGGTACCT ATTGCTATTC TGGTTATCGT TTCATTCCCC CCTCTTGTAG GACATGAAAG TGGGTTCATT CGTCGTTGAT ATTCATCCAG AAGCTGACAC GTCGCCGTTT AGTCATTGGA ATTTTGTGTG GTCTAGTATG GGGCTTGTGG GTTGGCTTTG CCATACTTGC AGCTGGCACA TTCGTAGGAG AGATCGCCAC TTGGGTGGCC TTTAAGTGGT GCTGTCAGAC CAGAGCTGCA AAGCAAGTCA CATTCTCTTT AACTCTGATC GGCATGACTG ATGAACAATA ATATTCAGAT TTGAGAAGAA GAACAGATTA TACGCAGCCT TGACGCAGCT TATTCGTGAA AAGGTTAGGG AGCCAATCAT GTATGCCGGA CGAATACAAG CGCTAATTTG ATGTATAACA ATAATAGAGC TTCATGTTTG TTCTCATTTT GCGATTTAGT GCCGTCCCAG GCCATATAAC AACAGCTGTG AGTGTCTTCA GTTTCGTCAG GCAGCAAGTA TGACTCATGA TGCATGTATT GGCGTTTAAC AGGTATCAGC GTCCGCCGGC GCAAACTTCT GGAGCTATCT TCTTGCTGCT TTTCTCACTC TTCCAAAACA GTGGACGATT GTCTACCTCG GAAAAGCCTT TGGAACAACT AACCGAACCA ACACCATCAT TTCTGTCCTC ACGACAGTGC TTACCATCCT TGCCACTGCT GTTGCTGCTG TGTACATCTA TTATCAAATG CGACTCGTCA TGCGCCGATG GACGTTGGCT TTACCGGCAC ATGTGGAAAG CAGCAGCACA AGTAATATAA CTTTGTCAGA ATGGGCGGAT GAAAAAGGCC AAGATGGTTT ATACACTCGT CGTCGTTGGA TGGCTTCCAA CGGCAGCGAC GAGTATGTCA ATAGGTGTGA GGGCCGTACG TTGACCAGAT CCTGGAGCAT GCCAGAACAT ATGAGCGAGG AGGAGCTGAA GGAGTGGGTG AAGAGTTTAG AAAATGAGGA GTATGCCTCA AGTGCGTCCG CCCAGCTGAG CGCGGAAACA GGGGATGACA GTGCATCCGA AAGCGCCGCA AACATAAAAA TTAATATTCA GATGGAGCTG GGCTCCCTTC TTCCCACTTC CTGGCCGCCA GTTACACCCA GGTTTCCTGA GCCTTCGAAT AATGTAATGA AAAGTCCAGG TTTAGGGATC CCTCAAAGTG TATCTCGGGA TTCCAACTGC TCTTCTCCTT CACCCCCTCT TCTGGAGCTC GACAATGCTT ATACACCTAC TCTGGCTAGC CGTCGACCAT CGTATTCTCG GAGAATACCC TCCAGTTCCT CCATATCTTT CGATGTCCCC TGTACAATTC CTGGGACGAC ATGTCCACAT CGAGTGGGGG GACGTGAGGT CGCGGACGAA GCCGATGCTT ACGCCATCGC ACACGGCGCT CGTCGACCCG AATTTCGACG CATGCGAGGT GACTCTCGTG CTGCTCTGTT GGGTCGGCCG GTGGATGACG CAGCACTTCA TCAGTGTGGT TCCAGTTGGA GAAGGGAATA CTCACACTCC TATGGGCGGT CGCGCGGAAG CAGTAATGCC ACTCTGTCGA GGAGCGATAT TGATGAGCTG GGGCGTGCGA GGGGTGATTC AGTTAGCACT GCTGGGACAG GATACTCCTA CGGCCCACCA ACATTAGCTG ATCTAGGAGT GGTAAGAGGA GAAGGTGGGT ATGTCAGGAT GGATCAACCT CAGAGAGGCA AAGGCGAAAG TTCCGCTGCG GTACTCGGCG GGCTGATAGA CGAGGGGCTT AGAACTGAGA TTTCGAGGGA TAGGAATGAT ATGGAGTCAT ATCAGAGGGA AGGATCAACG ATATTGAAAG GAAACGAAGG AAAAAACCAA TTAGGTGATG AGAACGTCTG ACTTTAGAGT GTCACAGAAT ATCTTACATT AGGTCAAGGC TTTTTTTATC TTCTTGCTGT GGGTACGTAT GTTTGTTTGT TTGTCAATAT AGCATACGTT TTCGTCCACG CATTATCATT AGTCTTTTCT ATTTCCGTTT CTTCAGTTGT GCTGCGGTCA TTTCTGGTTT TCATCTGCGC TAGATCATTT GTAGACAATG TCAATGTAGA GTTTCGAATG CCTGC
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Protein sequence | MRHRFYLPTI VRDQTFLSFV RQRHHSHHHP YLTPSLPSLT PKHEPDLSSD APPGSSSAAS EKDITSVLSL LREDYVAVKE HIKVMDYKQV LKRAAQRHMY KWYAILIIAG TLTALITAKH DAVVDFCRPI TEKIRSWPAG WLVPIAILVI VSFPPLVGHE IIGILCGLVW GLWVGFAILA AGTFVGEIAT WVAFKWCCQT RAAKFEKKNR LYAALTQLIR EKSFMFVLIL RFSAVPGHIT TAVSASAGAN FWSYLLAAFL TLPKQWTIVY LGKAFGTTNR TNTIISVLTT VLTILATAVA AVYIYYQMRL VMRRWTLALP AHVESSSTSN ITLSEWADEK GQDGLYTRRR WMASNGSDEY VNRCEGRTLT RSWSMPEHMS EEELKEWVKS LENEEYASSA SAQLSAETGD DSASESAANI KINIQMELGS LLPTSWPPVT PRFPEPSNNV MKSPGLGIPQ SVSRDSNCSS PSPPLLELDN AYTPTLASRR PSYSRRIPSS SSISFDVPCT IPGTTCPHRV GGREVADEAD AYAIAHGARR PEFRRMRGDS RAALLGRPVD DAALHQCGSS WRREYSHSYG RSRGSSNATL SRSDIDELGR ARGDSVSTAG TGYSYGPPTL ADLGVVRGEG GYVRMDQPQR GKGESSAAVL GGLIDEGLRT EISRDRNDME SYQREGSTIL KGNEGKNQLG DENV
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