Gene CNC02050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC02050 
Symbol 
ID3256698 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp573734 
End bp576428 
Gene Length2695 bp 
Protein Length694 aa 
Translation table 
GC content49% 
IMG OID638255427 
Productexpressed protein 
Protein accessionXP_569972 
Protein GI58265632 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.396797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGAAAAATCA TCTCCATCTC TCTTTCACGT TCCCGAGAGC TTAGTGAGCC CTCTTGCAGT 
GCTCTCCACT TCGGTCATCT CCCCCCTCCA AGCATGCGCC ATCGCTTCTA TCTGCCTACA
ATCGTCAGGG ACCAAACCTT TCTCTCCTTC GTCCGCCAAC GCCACCATTC TCACCATCAT
CCATACCTCA CTCCATCATT ACCATCCCTT ACCCCTAAGC ATGAGCCGGA CCTTTCCTCA
GACGCACCAC CAGGTTCCTC TTCTGCTGCC TCGGAGAAGG ATATTACTTC TGTTCTGTCA
CTATTAAGAG AAGACTATGT GGCTGTAAAG GAACATATAA AGGTCATGGA CTATAAGCAA
GTGTTGAAAA GAGCTGCGCA AAGACACATG TATAGTGAGT ACATCCCATC CTAATTTCAA
AAGTCTGTTT AAAGAACTCA CAAGTGCAGA GTGGTATGCC ATCTTGATAA TAGCAGGTAC
CCTGACCGCC CTGATCACGG CTAAGCATGA TGCGGTCGTC GACTTCTGTA GGCCTATAAC
AGAGAAGATC AGAAGCTGGC CGGCCGGATG GCTGGTACCT ATTGCTATTC TGGTTATCGT
TTCATTCCCC CCTCTTGTAG GACATGAAAG TGGGTTCATT CGTCGTTGAT ATTCATCCAG
AAGCTGACAC GTCGCCGTTT AGTCATTGGA ATTTTGTGTG GTCTAGTATG GGGCTTGTGG
GTTGGCTTTG CCATACTTGC AGCTGGCACA TTCGTAGGAG AGATCGCCAC TTGGGTGGCC
TTTAAGTGGT GCTGTCAGAC CAGAGCTGCA AAGCAAGTCA CATTCTCTTT AACTCTGATC
GGCATGACTG ATGAACAATA ATATTCAGAT TTGAGAAGAA GAACAGATTA TACGCAGCCT
TGACGCAGCT TATTCGTGAA AAGGTTAGGG AGCCAATCAT GTATGCCGGA CGAATACAAG
CGCTAATTTG ATGTATAACA ATAATAGAGC TTCATGTTTG TTCTCATTTT GCGATTTAGT
GCCGTCCCAG GCCATATAAC AACAGCTGTG AGTGTCTTCA GTTTCGTCAG GCAGCAAGTA
TGACTCATGA TGCATGTATT GGCGTTTAAC AGGTATCAGC GTCCGCCGGC GCAAACTTCT
GGAGCTATCT TCTTGCTGCT TTTCTCACTC TTCCAAAACA GTGGACGATT GTCTACCTCG
GAAAAGCCTT TGGAACAACT AACCGAACCA ACACCATCAT TTCTGTCCTC ACGACAGTGC
TTACCATCCT TGCCACTGCT GTTGCTGCTG TGTACATCTA TTATCAAATG CGACTCGTCA
TGCGCCGATG GACGTTGGCT TTACCGGCAC ATGTGGAAAG CAGCAGCACA AGTAATATAA
CTTTGTCAGA ATGGGCGGAT GAAAAAGGCC AAGATGGTTT ATACACTCGT CGTCGTTGGA
TGGCTTCCAA CGGCAGCGAC GAGTATGTCA ATAGGTGTGA GGGCCGTACG TTGACCAGAT
CCTGGAGCAT GCCAGAACAT ATGAGCGAGG AGGAGCTGAA GGAGTGGGTG AAGAGTTTAG
AAAATGAGGA GTATGCCTCA AGTGCGTCCG CCCAGCTGAG CGCGGAAACA GGGGATGACA
GTGCATCCGA AAGCGCCGCA AACATAAAAA TTAATATTCA GATGGAGCTG GGCTCCCTTC
TTCCCACTTC CTGGCCGCCA GTTACACCCA GGTTTCCTGA GCCTTCGAAT AATGTAATGA
AAAGTCCAGG TTTAGGGATC CCTCAAAGTG TATCTCGGGA TTCCAACTGC TCTTCTCCTT
CACCCCCTCT TCTGGAGCTC GACAATGCTT ATACACCTAC TCTGGCTAGC CGTCGACCAT
CGTATTCTCG GAGAATACCC TCCAGTTCCT CCATATCTTT CGATGTCCCC TGTACAATTC
CTGGGACGAC ATGTCCACAT CGAGTGGGGG GACGTGAGGT CGCGGACGAA GCCGATGCTT
ACGCCATCGC ACACGGCGCT CGTCGACCCG AATTTCGACG CATGCGAGGT GACTCTCGTG
CTGCTCTGTT GGGTCGGCCG GTGGATGACG CAGCACTTCA TCAGTGTGGT TCCAGTTGGA
GAAGGGAATA CTCACACTCC TATGGGCGGT CGCGCGGAAG CAGTAATGCC ACTCTGTCGA
GGAGCGATAT TGATGAGCTG GGGCGTGCGA GGGGTGATTC AGTTAGCACT GCTGGGACAG
GATACTCCTA CGGCCCACCA ACATTAGCTG ATCTAGGAGT GGTAAGAGGA GAAGGTGGGT
ATGTCAGGAT GGATCAACCT CAGAGAGGCA AAGGCGAAAG TTCCGCTGCG GTACTCGGCG
GGCTGATAGA CGAGGGGCTT AGAACTGAGA TTTCGAGGGA TAGGAATGAT ATGGAGTCAT
ATCAGAGGGA AGGATCAACG ATATTGAAAG GAAACGAAGG AAAAAACCAA TTAGGTGATG
AGAACGTCTG ACTTTAGAGT GTCACAGAAT ATCTTACATT AGGTCAAGGC TTTTTTTATC
TTCTTGCTGT GGGTACGTAT GTTTGTTTGT TTGTCAATAT AGCATACGTT TTCGTCCACG
CATTATCATT AGTCTTTTCT ATTTCCGTTT CTTCAGTTGT GCTGCGGTCA TTTCTGGTTT
TCATCTGCGC TAGATCATTT GTAGACAATG TCAATGTAGA GTTTCGAATG CCTGC
 
Protein sequence
MRHRFYLPTI VRDQTFLSFV RQRHHSHHHP YLTPSLPSLT PKHEPDLSSD APPGSSSAAS 
EKDITSVLSL LREDYVAVKE HIKVMDYKQV LKRAAQRHMY KWYAILIIAG TLTALITAKH
DAVVDFCRPI TEKIRSWPAG WLVPIAILVI VSFPPLVGHE IIGILCGLVW GLWVGFAILA
AGTFVGEIAT WVAFKWCCQT RAAKFEKKNR LYAALTQLIR EKSFMFVLIL RFSAVPGHIT
TAVSASAGAN FWSYLLAAFL TLPKQWTIVY LGKAFGTTNR TNTIISVLTT VLTILATAVA
AVYIYYQMRL VMRRWTLALP AHVESSSTSN ITLSEWADEK GQDGLYTRRR WMASNGSDEY
VNRCEGRTLT RSWSMPEHMS EEELKEWVKS LENEEYASSA SAQLSAETGD DSASESAANI
KINIQMELGS LLPTSWPPVT PRFPEPSNNV MKSPGLGIPQ SVSRDSNCSS PSPPLLELDN
AYTPTLASRR PSYSRRIPSS SSISFDVPCT IPGTTCPHRV GGREVADEAD AYAIAHGARR
PEFRRMRGDS RAALLGRPVD DAALHQCGSS WRREYSHSYG RSRGSSNATL SRSDIDELGR
ARGDSVSTAG TGYSYGPPTL ADLGVVRGEG GYVRMDQPQR GKGESSAAVL GGLIDEGLRT
EISRDRNDME SYQREGSTIL KGNEGKNQLG DENV