Gene CNC01600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC01600 
Symbol 
ID3256483 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp443150 
End bp443977 
Gene Length828 bp 
Protein Length175 aa 
Translation table 
GC content47% 
IMG OID638255379 
Producthypothetical protein 
Protein accessionXP_569502 
Protein GI58264692 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5538] Preprotein translocase subunit Sec66 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACCT CACTCTTTGT TCCAGTGGCC TATATCACTG TGCTTGTCAC AGCAATGGCC 
ATCTTTTCTC GTGTCTACAG ACGGCGACGA GCTGGTACGC TTGCTTTCTT TCTTCTGATA
ATGGTGACTG ACTATTTCTG ACTATTTCAC GTTGTTTAGT CTCCAAGACA TCAATAGAAC
CATGGTTTCC TAGCCATCCT ACCCGAGAAG TCTATATGTC TCTGTTGGCT GACGAACCGC
CCGCACCCGA AAATCTCCTC AAGGCTGCTC TCCTGTCTCG CGCCATCACC GACGTTCAAC
GTATCTGGCG GCTCAAAGAC GACAAGACTG CCCTTGCTAG CCTTCATACA CGAGGTCTTG
TTGGTGACGA CACCATGGCT AGGTTTGCGG CTGCAGAGAA AGAGCTGGAA GCGGAAATCG
TGGATGTGAT CTCAGAAGCC AACACTTTCA AGCAAGGGTG GGGACAATTC TTATTCGCCA
CTGCTACCGA GATGGCCCAG TCAGAGAAAA CCAAGGAAGC TGTAATTAAC ATGCATAAGA
CAAGAATTGC AGAAGGTGTG GTCCTTTTTA CCACTTCCTA TACTCTACCT GCTAACGAAC
CACGTCGTAC AGAAAAACGT CTCGCACGGA GAGCCAAGTA TGATACATGA TATAAATATC
GATCCATAGT AGCCGAATAG GTAACAATTT CTTAACCATT CATGGAACAC GGAATCAGCT
TTATGTGGGC GGCTCCCCTA GACGTGCAAA TTGCTGTGGA CTTAGATGAT AGGGTATTCG
AAATCATTTG TTAAAATCAG GGCAGCGGCA GTGACACCTA ATAGCAAA
 
Protein sequence
MTTSLFVPVA YITVLVTAMA IFSRVYRRRR AVSKTSIEPW FPSHPTREVY MSLLADEPPA 
PENLLKAALL SRAITDVQRI WRLKDDKTAL ASLHTRGLVG DDTMARFAAA EKELEAEIVD
VISEANTFKQ GWGQFLFATA TEMAQSEKTK EAVINMHKTR IAEEKRLARR AKYDT