Gene CNC00560 details

Gene Information

• Locus tag: CNC00560
• ID: 3256740
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006685
• Strand: -
• Start bp: 155391
• End bp: 157621
• Gene Length: 2231 bp
• Protein Length: 525 aa
• GC content: 47%
• IMG OID: 638255274
• Product: hypothetical protein
• Protein accession: XP_569345
• Protein GI: 58264378

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGTCAA TGACATCTTT AGAACGTAAG CTCGTCATCT CCACTGCAAT CCAAACCACT 
GATATACAGT CAGTTCCCCT CGCTCGACTT AGCATCTCCA ATCCTCGGCT TGCGCCAGCC 
GGTGCCTCCC CAAAAAGCCT GAATTGGGAC TCATAGTAAC ATCATTCAAT TATCATGGTG 
TGAGGTTCGC CTCTGACCAT TGTTAGTTCC AACTGTATAA TTAAAACGAA TGTGACCAGC 
GACCCAGCAT CTCTCAGACT GCAGATTGTG CATGACACAT CTACCTTGGT GAGCAAAGTC 
CGACTAATGC ATGTAATGTG ACGCCGTTTC TGATAAGTAA AACTGCATCA GATCGTTAGA 
GACTTACCTG CTTCAGACTT GATCAATGCT TCAATTACTC GACGTATCAC GCATATTGGG 
CAGCAAGCTG CTTTCCGATA TGATTGGCCT CTGAACGCAG GAGTCGGTGC AAAGGTGCGT 
TATTCCTCCA TATCATCGCC GAATTCAAAT TATGGCTAAT GAGATTTATT TTTACAGACG 
CAAGAATGCT TTCAGGTTAT TTTTCAGAAC GCCACCGACC TCACATCTTT ATTGGACCAC 
TTGAAGCCTT TCTTCAATAT TCAAACCAGT ACAACCAAAC CCATCACCGT CACTGCTTCT 
CAGCCAACAC AAGTCCAGGC CAAGGAAAAC TCATCAACCA AAAAGAGGTC TCCTTCTAAG 
TCGGGACAAA AGAAACAAGT GGCCAACCCA GCTCCCATCA GGGCCTCACC GAAAGGAAGA 
CTCGCAGGCG ATACAAGAGC TGTCAACAAG CCTCGGCCTA CTTCCCAACC AAGCTTGGCA 
TCAAATCCTC GCGCACCGAA AGTCAACACT CTTGGATCAT CGCCAACAGC CAAATCGCTC 
GGTACCGACG GAACGGTTCC TTCGACGTTA TCATCGGATG GGCCTCGAGC TGTGACTAAG 
GATATCGGCA GGCAATCACC ACTTCCAGTT CATGGACCAT TAGCGTTTTC AATGAACGAT 
CCCACTATGG CCGGACTCAA GAGGAAACTT TTAGCTGGAT TCGACCCGGG CACTACCGCC 
TCTGTCACCA TGCACCCTTC TCAGACCGCT AGAATCACAG GCTCTCCGTC GCATTCGGAA 
CCTCAAACTC ACGAGGCAAC GCCTTCTCGT TCCGTTACTC ACAAAAGTGA TCCTGAGTCT 
ACTACTAATG AGAGTGCCCC TTTTAATTCT CACTTCCCAC CTATTGTCCC TGTACAAAAG 
CCAGCACCAA CCTTCCAACC CACCTCGGTC GACCTTATAA CCTTTTCCTC ACCTATCATG 
TCTTCCAATT CCCTTCCTCC CCCGCCTGGC CCAGCGAGAA TCGTACTGGG TGGATCAAGT 
GATATAGAGA TTGGTAGTGA GTGTGATTGG CCAGTCATGC TTACAGAGGA GAAGCAAAGA 
GAAGAAACTC TAAAGAGGCT TGTGGAAGAG GATCTCGATG TAGAAATGAA TCCGGATGAT 
GGTTCTGCAG TGAGGAAATC TCGTTCTCAA GCTTGCATTA TGTTTACCAG AAACCTTGAA 
GCATTATTCC TCTAATCAAC AATGCTGGAC TGTCCCTCCG ACTAGCTATG GGACGCTACC 
CACGGCTTTA TCTTTAGCAG TCAATGGGCC TGCCAGCTAT GAGCTGTCCG ATCAAAAGCT 
CTTCGAACTG ATCTGTCAAA TTTTCAGAGA GCCAAAGTTC GTAAATCTCG TGAGTAGACT 
TTGCTATTCC TCGCGGACGA TTGTTAATGT CTGTCCATTT AGTATGGGAA AGTCAGTCAT 
ATATTAGGTC AAGTCTCTAT TGCTCAACAT AATAACCCTT ACCCGACTCC GTCTGAAAGC 
TATGCCAGCC TTCCCCTTTT TACTCCGCGA GGCGAGAGCG TCTACTCCCA GGAATACACC 
GAACGGGGTT GCCACAGTTA CTCTTCACAG GACCGTTCGA ATTACAAACG GCCTGCTTAT 
TCTTTGGAAT ATCATGATAA CCAGACCATT TGGAAGCGCA TGAGGGTGGG TGAGGAAGAG 
ATATATTTGT ATGATGATCT GGAAGAAGAG GATCGTATGT GCTGAATATT TGTCCGGCCA 
TGTGTTTCAA AGATAGAGTG GTGCCGCCCT TTGTTGCCGT ACTGTATCGA GAGCGTTACT 
AGTTTTAAAT ACATACAACA AGGACTCTTT TTATTGTATA TTGGGGTGTC TGATTATGTA 
TTTATGCAGT A 

 

Protein sequence

MTSLELPLAR LSISNPRLAP AGASPKSLNW DSYSNCIIKT NVTSDPASLR LQIVHDTSTL 
IVRDLPASDL INASITRRIT HIGQQAAFRY DWPLNAGVGA KTQECFQVIF QNATDLTSLL 
DHLKPFFNIQ TSTTKPITVT ASQPTQVQAK ENSSTKKRSP SKSGQKKQVA NPAPIRASPK 
GRLAGDTRAV NKPRPTSQPS LASNPRAPKV NTLGSSPTAK SLGTDGTVPS TLSSDGPRAV 
TKDIGRQSPL PVHGPLAFSM NDPTMAGLKR KLLAGFDPGT TASVTMHPSQ TARITGSPSH 
SEPQTHEATP SRSVTHKSDP ESTTNESAPF NSHFPPIVPV QKPAPTFQPT SVDLITFSSP 
IMSSNSLPPP PGPARIVLGG SSDIEIGSEC DWPVMLTEEK QREETLKRLV EEDLDVEMNP 
DDGSAYGKVS HILGQVSIAQ HNNPYPTPSE SYASLPLFTP RGESVYSQEY TERGCHSYSS 
QDRSNYKRPA YSLEYHDNQT IWKRMRVGEE EIYLYDDLEE EDRMC