Gene CNB05520 details

Gene Information

• Locus tag: CNB05520
• ID: 3255965
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006684
• Strand: +
• Start bp: 1551473
• End bp: 1553354
• Gene Length: 1882 bp
• Protein Length: 553 aa
• GC content: 51%
• IMG OID: 638255194
• Product: conserved hypothetical protein
• Protein accession: XP_569295
• Protein GI: 58264278
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1498] Protein implicated in ribosomal biogenesis, Nop56p homolog

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.00050956
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGTTAG CGGACGCCCT TCTGGCAGAC CTTGATGGTC TCTCGGATGA CGAAGCTCGA 
TCTCCTTCTC CTGGCCCCGA GGCCTCCTCC TCGTCAATGC CGCCTCCTGG TTTGCCCAAC 
AAAGGAAAAC GTCCCGCCAG CGCTATGGAA GTCGATGATG GCGAAGGAGG TGCGAATGAA 
GATGAGGGAG ACGATATGAA GCTGGAAGAC GGGACGAGTG CTGTGGGATT TGTACCTGAA 
GGAGGTGTAA GGCCTGCAGA TGAGCTGGAC AAGGAGGAAG TGGAAAAAAC CGATATGAAG 
GGTGTCGAGG ATGTGAAGAA AGTAGCCAGG TTGGCAGGAA GCCAGAAGCT TCGAGATGTT 
CTGGCAGTAC GTGCATTTAC TTTGGTCGTC AGGGTTCTAG CTAAGTGGTA ATTTAGGATA 
TCATAAAATA CACCGAGTCT CCCACCGATA TGTCTTCGTC TGCCGGTCCC CTCGAGGAGA 
ATCCAGAGTA CCATCTTGTT GTCACTGCGA ACAACATGTC CGTCGAGGTT GACAACGAGA 
TTCTCATCGT GCACAAATTC ATTCGTGACC ACTATGCTCC TCGATTTCCG GAACTCGAAC 
AGCTCATTGC CGAACCTTGG ACATACATTG CCGCCGTTAA TGCCATCGGT CAGTCTGAAG 
ATCTAACGAA GGTCACATTC CCCAACACCC TCCCTGCGGC TACTGTACTC TCTATCACTC 
TTACTGCTAC GACTTCCCGT GGTCGGCCGC TCACGCCTGC AGAGTGGGAA ACAATTCAGC 
GCGCCATCGC TGTCGCCCAA AATCTCCGTT CGGCGCGAGA ACAAATTTTT TCCTACGTCG 
AGTCCCGTAT GGCTGCTGTA GCACCTAATT TGTCTGCTAT TGTGGGCACC GGTATCGCTG 
CCAAATTACT TGGTTTAGCA GGTGGTCTCC ATGCGTTTAG TCGACAGCCG AGTTGTAATG 
TGATGCTTTT TGGCGCGATG AAGAAGACTT TGGCCACCTC TCATCTTTCT GCTGCCTCTC 
AGCAACGACA TACCGGCTTT ATCTTCCAAA GCTCTATAGT ACAGAGTGCC CAGCCTGAAG 
ATCGAAGAAG AGCTCAGCGA GCGGTGTCTG CCAAGTGTGC TCTTGCGGCC AGGATCGATG 
CAGGAAAGGG GTCTAGGGAC GGATCTTATG GAAGAAAGTG TTTGGCGGAT TTGCAAAAGA 
GGATTGAAAA GATGGCGGAA CCTCCTCCCA ACAAGATGAT CAAGGCGTTG CCTATCCCTC 
AGGAGACTAA CAGGAAGAAG CGTGGTGGTA AGAGGTCAGT TGTAATCATT TTGTCGATGA 
GGAAAGCACT ATAACTGACT CAATACTTAA GAGCTCGAAA AGCCAAGGAA GCGTACGCCC 
AGACCGAATT GAGAAAGTTA CAAAACCGAA TGGAGTTTGG CAAGGCGGAA GAAGAGATCG 
GGGTGGACGA CGAGACTGTT GGTTTGGGTA TGATCGGTTC CGCCGGAAGG GTCCGAGGCG 
AGATGGCAGA TGCGAGGAGT AAAGGTACAT ACATATCTAT TTTTCCTGCT CCTTCTAATA 
TCATGCTGAC CATTTCTGTT TTAATTAGCT AAACTTTCTC GAGCCAACAA ACTTCGAACT 
CAGCTCCTTG GTCGCTCAGT CACATCCAAC GACGCTGCCA GCGGTATGGC CACCTCCTTA 
TCATTCACGC CTGTCCAAGG TCTTGAAATA GTTACACCCT CCCTCTCTGC AGCCCAGAAA 
GTACAGGCTG CGAATGACAG ATGGTTCTCC GGGGGTACAT TTACGCATGT AAGGAAGGGG 
GGAAGCAGTA TTCCGGGACA GGAACAGAAA TAGGGGTTCA AGTGTGGTCC AGGATAGAGA 
ATTGTATGTT TAGGTATGCA TC 

 

Protein sequence

MSLADALLAD LDGLSDDEAR SPSPGPEASS SSMPPPGLPN KGKRPASAME VDDGEGGANE 
DEGDDMKLED GTSAVGFVPE GGVRPADELD KEEVEKTDMK GVEDVKKVAR LAGSQKLRDV 
LADIIKYTES PTDMSSSAGP LEENPEYHLV VTANNMSVEV DNEILIVHKF IRDHYAPRFP 
ELEQLIAEPW TYIAAVNAIG QSEDLTKVTF PNTLPAATVL SITLTATTSR GRPLTPAEWE 
TIQRAIAVAQ NLRSAREQIF SYVESRMAAV APNLSAIVGT GIAAKLLGLA GGLHAFSRQP 
SCNVMLFGAM KKTLATSHLS AASQQRHTGF IFQSSIVQSA QPEDRRRAQR AVSAKCALAA 
RIDAGKGSRD GSYGRKCLAD LQKRIEKMAE PPPNKMIKAL PIPQETNRKK RGGKRARKAK 
EAYAQTELRK LQNRMEFGKA EEEIGVDDET VGLGMIGSAG RVRGEMADAR SKAKLSRANK 
LRTQLLGRSV TSNDAASGMA TSLSFTPVQG LEIVTPSLSA AQKVQAANDR WFSGGTFTHV 
RKGGSSIPGQ EQK