| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB05090 |
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| Symbol | |
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| ID | 3255627 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006684 |
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| Strand | - |
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| Start bp | 1448880 |
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| End bp | 1452258 |
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| Gene Length | 3379 bp |
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| Protein Length | 849 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | 638255153 |
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| Product | CHL1 helicase, putative |
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| Protein accession | XP_569258 |
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| Protein GI | 58264204 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | [TIGR00604] DNA repair helicase (rad3) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAACC GACCAGCAGA ACCCGCGACT CCTTGTCTCC CTACACCAGA GACATTTCCC
TTCCCCTATC CTAAGCCTTA TGACATCCAG CTAGACTTAA TGCGCGTCGT CTTTAGGGCC
ATCGAAGATG GCAAGATAGC AATTGTAAGC CTCCATTTCA TTCTTTGTGA TTAACTCTCT
AAATAGATTG GACAGGTCGA GTCACCCACA GGAACGGGTA AATCGCTATC CCTTTTGACG
TCAACCCTCA CTTGGCTATC CCAGCATCAA GCAAGACTCG ACACTGCCGC CGAAGTCTCT
CTTCGAGAAC AATTTTCAGC TGACGATCCC GATGACCCAC CATGGGTCAT TGAACATGCA
ATCAAGGCAA AGATGAATGA GCTCAGGGCT GTACAGCTGG AGAGGGAAGA GAGACTTGAA
AAAGCAAGAA AAAAAGAGAA GCAGATGAGA AGGGAAGGTG GTGTAGGAGC GTTTAGACAT
GGGCTAGGAG GTGGGAAGAG AGTCAAGACA GGAGCTGAGG GTGTGGGAAA AGCAAAGACC
GGGGAAACTA AAGAAGATGA TTTCTTGCCC GAGGATAAGG AGGAAGATAA TGAAGAAGGG
CCTTATTTGT CGAGAGAGGT GCGCGAGCTG ATGAGCAAGT GAGTGATTGA ATGGCAGTAG
CGGTGACTAA GCCATTTCCA GATTCGAACC TTCAGGGACC ACACGTAAAG AAGCGGATGA
AGATGAGGAA GACGCGCCCA AGGTTCGTCT GTGCGCTATT ATGATGCATT ATGAACATGG
CTGACCAGGC CTTAGGTATA CTACACTTCA CGTACTCATA CACAACTCCG TCAATTGACT
TCCGAACTTC TCAAAACATC ATTTGCCAGC TATGATTCTG TACCGGAATC TTCTTCAGCT
GAAGCACCGT CACATGGTGT CAGCTTAGTC CCCTTAGGAA GTCGTAAACA GTTGTGTATA
AACGAAAAGG TTCGGGCATT GGCTAGAAAT GGCGGTGATG AAAGGATGAA CGAAGCATGT
TTGGATATGC AAAAGTCGGG TAAGTCTGAC AAGTCTTATC AAGACGTACA GCTGAAAGTA
TACAACTCTT GACAGGTAAA GCAAGATGTG AATTCTTACC AGCAAAAGCA GACGAAATAA
CGATGCTTGA CGCACGAGAC ACGATCTTAG TCAGTTTTAA ATTCATCCTA GAAATGGAAA
TACTGATGAC CGATTGCAGG CGTCCGTAAA AGACATTGAA GATATTGTGA CGATGGGGAA
GAAATCTTGT GTCTGCCCGT ATTATGCTAC CCGTAAGGCT GTAAAGCAGA GCCAGGTATG
TATACAAGTA TCTTTAAGCC ATGTCCAGCT AACATAGTCC TAGATTGTTA CTCTACCATA
TAATTTGCTT CTTCAGAAGA ATTCTCATGA AGCCCTGGGT ATAAAGCTCA AGAACCAAGT
AGTGGTTATT GACGAAGCCC ATAGTAAGGA CGCTTTTTTC CCTAGCTGCG CCTTTTCTAA
CGGCGGTGAA CAGATTTGAT CGACACACTC CTGTCTATCC ATTGCACCAC TCTGACCTCA
ACAAATCTTG CCAACGCAGT GTCCCAACTC CAGCAATATC TCCAACGCTT CAAATCACGT
TTAAAACCCA TACACTCATT GTGGATTCAG CAGATCTTGA GTTTGCTCCA AGGTCTAATC
CGCGTTTGCG ATAAGTTTTT TCAAGACGCC AAATCCCAAA CGAAGGAGAG CAAACCGGTA
GGAAAGCCCA AAGTAGAAGT TCTTGATGTA AATAATCTTA TGGGGAGAAT TGGGGGCGGA
AGTGATCAGG TGAATCCTAT AGAGCTACTA GCCTATCTTA AGGAGAGTAG ACTCGCGAGA
AAGATAAGCG GTTTCTCCGA GCATGTGGCG GAGCAAGCTG CTTTGAAAGG TGAGTTATAA
CTCTGCATTC AAGAACCGTC ACTCAAATCT GGCTGCATAG ACGCCAAGAC CTCACGAAGC
GCCACAGCTC GACATGCATC GATAGCGGCC TTTCACAATG TAGAATCCTT CCTGTTATCC
CTCGTAGATG CGAAGGATGA CGGTAGGATT ATTTTGTCCA TTGATGATTT GGATAAATCA
GAGCCGGTTG TCGTCATCAA ATACGTCTTA CTGAATCCCT CTGAGAGGTT CAAGGAAGTT
GTCGAAGAAG CTAGGAGCGT AATCTTAGCT GGAGGTACAA TGGAGCCTGT GTGTCTACAT
GTTTCGTGCT GTGCTCGAGA ATGCTGACAG GGATACAGAT AACAGACTTC TTGCAACAAC
TCTTCCCTTC TATACCTAAA GACCGCCTCT CGACTCTTTC CTGCTCACAT GTCATACCCA
AAGAGAATCT TCTCACTCAA GTCGTCAGTG TGGGTCCGAG AAAAAGCGAA TTTGAGTTTA
AGTTCGGTAA TAGGAATGAT GAGGCTTTGG TGAGTTATAC GCGGAAGAGG TTCTTGGGTG
GGATTGACTT ATCAATTGCA GTTAACCGAT CTGGGAGCAG TCCTACAAGC TACGATAGGT
GTGGTACCAG ACGGCGTCGT TGTCTTCCTC CCATCGTACG CTTTCTTGGA TAAAGTGAGA
GCTTTCTGGA CGAAGTCGGG ATTGTTGCAA AGGTTAGGTG AGCGTAAACA GGTAAGCAAA
ATTTTGAACA AGCTGAAACA TGTGCTGATC TTCTACGGGT AGTTGTTCTA TGAACCTCAA
ACGTCTGGTG ACGTTGAGAC AATTCTTCGT GATTATGCTC TGGCTATCTC ATCTGTGAGC
GTTTCTGATA TTGACTTGAT TTTTTGGTAA CTAAACCCTT CCAGTGTTAT GCGACATCTA
CCTCTGGTCA AAAGTCTCGT AAGACAGGTG CACTTATGTT TGCGGTCGTC GGAGGTAAAC
TTTCAGAAGG TGCCGCTTGT CCTAATTATG TTGTTACCAA ATGGCCCTAA TATTTATTTA
GGTATTAACT TTTCGGACAA TCTTGGCCGC TGTGTAATCA TGGTTGGCCT TCCGTTCGCC
AATGTCAGCT CAGTTGAACT CCAGGAGCGT ATGAGATACG TCGAAACTGT CCCAGGTGCT
GGCCAAGGGG CCTCTAGGGA AATGTACGAG AATCTGTGTA TGAGAGCCGT CAATCAATCC
ATCGGTGAGG CCTTATTTCA CTCTCGTGCC CATCAGGCAA AGGCTCATGT TTCGCTGCAG
GCCGAGCCAT CAGACATGCC AATGACTATG CTACAATCCT ACTCGTGGAT AAACGCTACG
CGACTTCTCG TATCCGTAAC AAACTTCCGA AGTGGATTGG AAAAGACGTA AAGGTGCCGC
AAGACTTTGG GGGAGTTGCC AGAGGGGTAG CGGCATTTTT CAAGGAAAAG AAGGACAGGG
GACTTACATG ATATTATTG
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| Protein sequence | MTNRPAEPAT PCLPTPETFP FPYPKPYDIQ LDLMRVVFRA IEDGKIAIVE SPTGTGKSLS
LLTSTLTWLS QHQARLDTAA EVSLREQFSA DDPDDPPWVI EHAIKAKMNE LRAVQLEREE
RLEKARKKEK QMRREGGVGA FRHGLGGGKR VKTGAEGVGK AKTGETKEDD FLPEDKEEDN
EEGPYLSREV YYTSRTHTQL RQLTSELLKT SFASYDSVPE SSSAEAPSHG VSLVPLGSRK
QLCINEKVRA LARNGGDERM NEACLDMQKS AKADEITMLD ARDTILASVK DIEDIVTMGK
KSCVCPYYAT RKAVKQSQIV TLPYNLLLQK NSHEALGIKL KNQVVVIDEA HNLIDTLLSI
HCTTLTSTNL ANAVSQLQQY LQRFKSRLKP IHSLWIQQIL SLLQGLIRVC DKFFQDAKSQ
TKESKPVGKP KVEVLDVNNL MGRIGGGSDQ VNPIELLAYL KESRLARKIS GFSEHVAEQA
ALKDAKTSRS ATARHASIAA FHNVESFLLS LVDAKDDGRI ILSIDDLDKS EPVVVIKYVL
LNPSERFKEV VEEARSVILA GGTMEPITDF LQQLFPSIPK DRLSTLSCSH VIPKENLLTQ
VVSVGPRKSE FEFKFGNRND EALLTDLGAV LQATIGVVPD GVVVFLPSYA FLDKVRAFWT
KSGLLQRLGE RKQLFYEPQT SGDVETILRD YALAISSCYA TSTSGQKSRK TGALMFAVVG
GKLSEGINFS DNLGRCVIMV GLPFANVSSV ELQERMRYVE TVPGAGQGAS REMYENLCMR
AVNQSIGRAI RHANDYATIL LVDKRYATSR IRNKLPKWIG KDVKVPQDFG GVARGVAAFF
KEKKDRGLT
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