Gene CNB04020 details

Gene Information

• Locus tag: CNB04020
• ID: 3255674
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006684
• Strand: +
• Start bp: 1181122
• End bp: 1183125
• Gene Length: 2004 bp
• Protein Length: 526 aa
• GC content: 48%
• IMG OID: 638255045
• Product: AE016780 membrane protein, putative, putative
• Protein accession: XP_569225
• Protein GI: 58264138
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2814] Arabinose efflux permease

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTCATCTCAC ATCGGGGCGA CTGTTTCGTC GGAGCAAGTC AGAGAGAGCT TTGGTCACTC 
CATCAGTAGA AGCTGTCGGT AATCAAAGAC TTCAACATGT CAGCAAACAC CACCGAGACC 
CTTCCGTCTA CACCCAGAAA AGAGCTCTCG ACGGACGTGA CCCCATCTAT CCTGTCGGAA 
TATCCTTCAA CCACCGCAGG TCTAGGAGAA CCGAAGCACA GTCGGCTGAC AGCCTTCCTG 
CCCAGGGGAT CTCTCCGGTG TGAATTTGAT CACCAACATA TCCGCAAGTT TGACTTTGGG 
TTTCTACCTA TTCCTCCTGG TCGACGGCAT GATCCTAGTA AAAAAGTGAG CGAAGAGTTT 
GTATTCACTT GGAAACTCAA TTTGCTCTTT GCTTTTGCAG CTGTATGTGT TTTATCTCTT 
AACCTTTATC CTTTCATGTC AAATCTGACT CCCGAAACAG ACTGTATCCG TCATGAATTT 
GTACTACATC CAACCCATGT TGGTTGCCGT TGCCGATTCT TTTGACGTAT CTCACGACGT 
CGTCTCGCGT ATACCCATTC TCGCCCAAGG TGGCTACGGC TGTGGCATCC TCTTCATTTC 
CCCTCTAGGC GACCTTGTCC GGCGACGCCA GCTTGTCCTG ATTCTAATGT TCTTTACAAC 
TTGTCTCTCC ATCGGACTTG CTCTCTCAAA AAATGTCAAC ATGCTTTCAG GGTTGAGTTT 
TGTGGTAGGG TTCTTCACGA TCACTCCTCA GATCGTCATC CCTTGGACTG CCGATTTAGC 
CCCTCTCAAG AGAAGGGCAA CAGCGATGAG TGTGACTCTT TCTGGCCTGA TTGTGGGCTT 
GGTGGTGGGT CGAACGTTGG CTGGTATCAT AAGTCTAGCT GGCTGGAGGT ACAGTTATTG 
GATGGCCGTG GGTTTACAAG GATGTAAGTT TTGGACTCTC GCATGATTTT TAACCAAACT 
AATGGTCCTG CTTGCTAGCG ATGCTTATAA TCTTATGGCT CTGTCTGCCT GATACTCCGG 
ATAAAAAGAT TGGCCTCACA TATCCACAGG TGGTAAGCTA CTTTGAATCA TTATATGCAA 
TTCGTCTGAC ATTGCATCTA GCTCTGGTCG ATGGCCAAAA TGTACACAAA ATATCCGACT 
CTCGCGCAAG CTTGCTTCCA AGCCTACACG ACTTCGGCGG TTTTCGCAGG CTTGTACGTC 
TTATTTTCTT GACAGTTTGG AGAGGGCACT CGCTGATGTT GTTTGTGACC ATAGCTGGAC 
AACCCTTACA TTCCTCCTCT CTGACTCACC GTACCACTAC TCCACACTCC AAATCGGTCT 
TTTCGGTCTC TTGGGCCTAA TCGCTGCTCT GCTCTCCCCT CTTTGGGGCT ACCTCATCGA 
CCAGGTCCAT CCTTATCTGG CTCAACTCGT TGGGATCTGG GTCTGCTTGA TCTCCATGAT 
TATCGGTCTC ACAGCTGCTA AAGTCAACGT CAGCGCAGTG TGCATTGCGA TTGCATTTTA 
CGATGTAGGA CAGCAATTGA ATCAGCTTGG GAATGGATAT AGAGTGGCGG GGATTGATCC 
TAATGCGAGG GCGAGATTGA ATGGATGTAA TCTGTTGGCT CTTTTTGCTG GACAGGTAGG 
TCTACTTTTC CTTGTATCGC GGTATTGGGG TGGTCATAAA TCTGACTGCA ATAAACCAGA 
CTTCTGGTAC GGCGATCATG ACCAAGATCT ACAATTCTCA TGGCTGGTAT CCCACTGCAG 
GAACGGCTGT TGCCTTCCTA GGTGTGGGCA TGCTTGCACT CCTCCTACGT GGACCGCATG 
AAACTGGGTG GATAGGATGG AGTGGGGGTT GGAAGGTTCT GAAAAAGGAG AAAATGAGTG 
ATACAAGTGC CAATGCGATT ACCGAAAAGT TCAAATCCAA GAAAAAGAAG GAACAAAGTG 
TGAAGCCAGT TGAGTGGCCG ATAGAAGGGG AAAAGAACGT CTAAAAACGT TTGTTGGGGA 
AATATATAAC CTTTGTACAT ACAA 

 

Protein sequence

MSANTTETLP STPRKELSTD VTPSILSEYP STTAGLGEPK HSRLTAFLPR GSLRCEFDHQ 
HIRKFDFGFL PIPPGRRHDP SKKVSEEFVF TWKLNLLFAF AATVSVMNLY YIQPMLVAVA 
DSFDVSHDVV SRIPILAQGG YGCGILFISP LGDLVRRRQL VLILMFFTTC LSIGLALSKN 
VNMLSGLSFV VGFFTITPQI VIPWTADLAP LKRRATAMSV TLSGLIVGLV VGRTLAGIIS 
LAGWRYSYWM AVGLQGSMLI ILWLCLPDTP DKKIGLTYPQ VLWSMAKMYT KYPTLAQACF 
QAYTTSAVFA GFWTTLTFLL SDSPYHYSTL QIGLFGLLGL IAALLSPLWG YLIDQVHPYL 
AQLVGIWVCL ISMIIGLTAA KVNVSAVCIA IAFYDVGQQL NQLGNGYRVA GIDPNARARL 
NGCNLLALFA GQTSGTAIMT KIYNSHGWYP TAGTAVAFLG VGMLALLLRG PHETGWIGWS 
GGWKVLKKEK MSDTSANAIT EKFKSKKKKE QSVKPVEWPI EGEKNV