Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNB03340 |
Symbol | |
ID | 3255948 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006684 |
Strand | + |
Start bp | 1004539 |
End bp | 1008002 |
Gene Length | 3464 bp |
Protein Length | 723 aa |
Translation table | |
GC content | 48% |
IMG OID | 638254978 |
Product | nonselective cation channel, putative |
Protein accession | XP_568910 |
Protein GI | 58263000 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTCGC TCGGCACAGC GCCCGCCGCC CCCCCCCAGC CCCTCCCAGA CACCGTGTTC CCGCTCATAC ATGAAGTCCA TGCCATCGTC ACCCACGCCA TAGACACTGC TCTCGACTGG GACCAGCTCA ACTCCCCGCC CGTAAACTAC ACCCTTGTCA GGCCTATCGT GCAGCGTTTT GCCCCCAGGC TCGAGCACCG CGCCAATGCC ACCGGCCTCG CGGAATCCAC CGCCCCGGAT GCTGGCGAGC TCGGTGCATC ACCACGTCCA GTGTATCAAG GGCCCTCCCT AGGCGAAGTT TTGTATGCGC TCATGGCCAA CCGGTGGGTA TGACTGAAAG TATACGCGGC GTGTTGCTGA AGAGCCGACG CTTGCATGGC ATGACAGAAT CCAATTCATC ACACTTTCCG CCGGCGATTT GAGTTCTGCC CCGTTGCAGA CTTGCCGAGC GGCGTTTTGT GAACTCCTAG CTAGTAAGTA TCATCTTGCG CTACGCCATG ATACAACGTA TAACGCGACG TGTGGTAAAG TCAAGGTCCT CCGTTCCCAA CCGTATGCTC AAGATGAAGC TGCCCTCGTC GGACAGCTTG TCCACGCCTA TTGTGCTTTT GAGGGCGCGT CTGACGAAGT ATGGGCGAGT CTCGGCGAGG ACAGGAAAGA TGTTGAAGAA ATGACCAGCA GTGCGCTTGA AGTGCGTAGC AATCGCGTAT TTCCAGTCAA CTCGTATTGA TAAGGTTTAG CTCGCCATCG TCTCTACTTC TAAAAACCTG CTTTCACTCC CTCTTATCCA GCATCTTGTG AACCTCATCT ATTCTGGCCA CTTGATCTAT TCTCCCATTT CCTCCCGCTC CATCATCTCC GACTCGTACA TTTCTGAGCG CACTCGACAA CGTCGTCGAG CATATGGCCA ATCGGGGCCT TCAGACTTTA CTTCTGTGCA TAGTCACGCC CATATCAACG ATGAGGACTT GCGAGAAGTC TATGTATACA ACCCGTATCA GGCTGGCTGG CTCGATCATT CCAGGCTCAA AGTGCCAAAA TGGAGAAAAA GTATGGAGTT TACAAGTTTC GTCATCCTCC TTGCCCTTTT CGTCTCCACT CTTGCCTGTG GGTGAAAAAA AAGTTCATTC TAACGAACTC CGCGCTTCCG CTCACATCTG TATCAGGGAG GGATCTCCAC CATCTCACTG TGGTGGAGAT TATCTATATT GTCTTTTCTT TCGGCTTCAT CCTTGACGAA TTTGCAGCTT CCAAAGAGCA TGGTTGGGCA GGTACGTTTT GGCTTGGCTA CTTGATTCAC GAGTCAGTTG GATCTCGTCT GATAAATCAA ATGTGTAAAC AGTCTATGCT GCAAATGTAG GTTTCCTTGG TATACCCGAC TGACAGACAA AACGCTCATA TCTATAGGCT TGGAACGCGT TTGATATGGG ATACGTGAGC AGCATACAAC TATTTTTCGA TTTTCCTTTT TCCGCTGACA GCCTATATTG AACAAGATTG CCATATTCCT CTTATACTTT GGCCTTCGAG TCATTGCTCT AGCTTCTCAT TCTACCAAAT CATCCGACTT GGCATTTGAC ATTTTAGCCT GTGCTGCGTG CATCACCTTC CCACGATTAG TATTCTTCGT GATCAAAGAG AATGTCGTCA TTCTTGCAGT GAGTCTTTAA ATCTTCAAGC TCGAATCAGG ATTAGATTCT CACCCTTTTT TTTTACTCAT TTTTTGGGTG TGATCAGCTT CGAGGCATGG TGGCTAGTTT TGTCAGCTTT ATGACTGTCA CCAGTAAGAA TCTAGATAAC ACTCTGACAC TTGTCGCGAA CTGACTTTTT ACACCGTAGT TCTGGCATTC ACTGGCATAT GTTTTTGTCT CTGGACCCTG GGACGTGCTA CATGGACTGT GAAGCAGATT GTATGGCTGA TGGCGTGAGT ATCGTCTTTC ATGACAGCCG AATACAATTA ACGACCGACA TGGTATCTTT TACAGTCAGA TCTGGGTAAG TCAGATCGCA CCACCCTTCG CCATTGTTTC TCGAAACTGA TCTTGTTGAA TGATTGCCAG TTTGGATCCT CATACCTCGG TACGTATTAT GCCGTGCATG AGATACTTTT GACTAACCCG TCAATAAAGG TTTCTCTGCG AGCGAATCCT TTCATCCGAT CTTTGGCCCC ATCGTGCTCA TTTCTTATGC GTATGTCTCT TCTCACAGAT CAAAATCCCG TTATGATCAG CTCATAGTAT CGTAGTGCAC TGTGTAATGT GCTTCTGATT ACAATGCTCA TTGCCATTCT CTCAAACAAG TTTGCTGCTA TCAACCAGAA CGCTCAACAA GAAGTAAATG AAAACTCTGC TTGCTCCTGG CGTCTTTTTT TTTTGTCCAA CCTGCTCACT GACTTGTTTT TTAGCACCTT TTTCAAAGAG TGGTCAAAAC GGTTGAAGGA GTCAAGACCG ATGCCCTCTT CTCTTACCTC CCGCCTATCA ACATTCTTGC CTTTGCCATC CTTGTGCCTC TCAGCTGGAT TGTTTCAGCT CGGACTTTGC ATCGGATCAA CGTCTTTGCC ATCCGCTTAA CTGTCAGTTT TTATTCCTCT TTTTCTTTTT CCCTTTTTCT CTCCCCCCAA AAGTCATGTC AAACTGACAT ACGATTCATG ATATCAGAAT TTTCCAATTT TGATCGCCAT CTCAGCGTAT GAGAGATACA CTTATCGCGC CAAGCAGAGG GCCATTCACC TTGGGGCCTC TACGATGGAT CGGGGGGGTA CGGATGTTCA AAGGCCCAGT CTTCTCGAGT AAGCCCTCCT CCACTCCGCT CAAAACCAAA CAAAAATCGT CCTGACTTGC GAGAAACAGT TCATGGCTGG GAGGCGGATC CGAATTCCTC ATCGCCTCGG CCTTTGAAGT CGGCCCGCCC GTTTTTCCTT CCCCCACCAG CAGCGCCAAT CAAAACTCAC CAGGTGGGCC CAAAGCCACG ACTATGCCAT TTGTAGAGGA TGACGGGGCA GCGACCACCA CCACCACCAC TCGGGCACGG GAAGCACCCA TCCTGAAAGC GGTAAAGAAA GAAAAGGACA AGAAGAAGAT CAAGACGTAT GATTCTCCCC TTGCCAAGCT GTTTGGACGA CCTACATTCT CTGCTTCGCC AGAAGAAGAA ACGACACTGA AAGACAAGGG TGTGGATAAA GGTAAAGAAA TCAGAGCGGT TGAACAACAG CAGGTGATTA GCGGCAAAGA AGGAGATGTC GAACAGCTGA AGAAGGAGGT CGAATTGGTG AGGCAGAGTC AGTTGAGGAT GGAGGAGATG CTGGCCGGGT TCTTGGCGGG TAAATCGGCG TGAGAAGCAG CATTAGAAAG TATGATCTAT ATAAAGGATA TGACGGACGG GCAAAAACGA TCTTGATTAA ATATTAGGAT TGATTTTTGT CTTGTCGCTT TTTTTGTATT GAAAACGATA GATGCAAATG CGGC
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Protein sequence | MSSLGTAPAA PPQPLPDTVF PLIHEVHAIV THAIDTALDW DQLNSPPVNY TLVRPIVQRF APRLEHRANA TGLAESTAPD AGELGASPRP VYQGPSLGEV LYALMANRIQ FITLSAGDLS SAPLQTCRAA FCELLAIKVL RSQPYAQDEA ALVGQLVHAY CAFEGASDEV WASLGEDRKD VEEMTSSALE LAIVSTSKNL LSLPLIQHLV NLIYSGHLIY SPISSRSIIS DSHAHINDED LREVYVYNPY QAGWLDHSRL KVPKWRKSME FTSFVILLAL FVSTLAWRDL HHLTVVEIIY IVFSFGFILD EFAASKEHGW AASHSTKSSD LAFDILACAA CITFPRLVFF VIKENVVILA LRGMVASFVS FMTVTILAFT GICFCLWTLG RATWTVKQIV WLMAQIWFGS SYLGFSASES FHPIFGPIVL ISYAALCNVL LITMLIAILS NKFAAINQNA QQEHLFQRVV KTVEGVKTDA LFSYLPPINI LAFAILVPLS WIVSARTLHR INVFAIRLTN FPILIAISAY ERYTYRAKQR AIHLGASTMD RGGTDVQRPS LLDSWLGGGS EFLIASAFEV GPPVFPSPTS SANQNSPGGP KATTMPFVED DGAATTTTTT RAREAPILKA VKKEKDKKKI KTYDSPLAKL FGRPTFSASP EEETTLKDKG VDKGKEIRAV EQQQVISGKE GDVEQLKKEV ELVRQSQLRM EEMLAGFLAG KSA
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