Gene CNB03340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNB03340 
Symbol 
ID3255948 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006684 
Strand
Start bp1004539 
End bp1008002 
Gene Length3464 bp 
Protein Length723 aa 
Translation table 
GC content48% 
IMG OID638254978 
Productnonselective cation channel, putative 
Protein accessionXP_568910 
Protein GI58263000 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTCGC TCGGCACAGC GCCCGCCGCC CCCCCCCAGC CCCTCCCAGA CACCGTGTTC 
CCGCTCATAC ATGAAGTCCA TGCCATCGTC ACCCACGCCA TAGACACTGC TCTCGACTGG
GACCAGCTCA ACTCCCCGCC CGTAAACTAC ACCCTTGTCA GGCCTATCGT GCAGCGTTTT
GCCCCCAGGC TCGAGCACCG CGCCAATGCC ACCGGCCTCG CGGAATCCAC CGCCCCGGAT
GCTGGCGAGC TCGGTGCATC ACCACGTCCA GTGTATCAAG GGCCCTCCCT AGGCGAAGTT
TTGTATGCGC TCATGGCCAA CCGGTGGGTA TGACTGAAAG TATACGCGGC GTGTTGCTGA
AGAGCCGACG CTTGCATGGC ATGACAGAAT CCAATTCATC ACACTTTCCG CCGGCGATTT
GAGTTCTGCC CCGTTGCAGA CTTGCCGAGC GGCGTTTTGT GAACTCCTAG CTAGTAAGTA
TCATCTTGCG CTACGCCATG ATACAACGTA TAACGCGACG TGTGGTAAAG TCAAGGTCCT
CCGTTCCCAA CCGTATGCTC AAGATGAAGC TGCCCTCGTC GGACAGCTTG TCCACGCCTA
TTGTGCTTTT GAGGGCGCGT CTGACGAAGT ATGGGCGAGT CTCGGCGAGG ACAGGAAAGA
TGTTGAAGAA ATGACCAGCA GTGCGCTTGA AGTGCGTAGC AATCGCGTAT TTCCAGTCAA
CTCGTATTGA TAAGGTTTAG CTCGCCATCG TCTCTACTTC TAAAAACCTG CTTTCACTCC
CTCTTATCCA GCATCTTGTG AACCTCATCT ATTCTGGCCA CTTGATCTAT TCTCCCATTT
CCTCCCGCTC CATCATCTCC GACTCGTACA TTTCTGAGCG CACTCGACAA CGTCGTCGAG
CATATGGCCA ATCGGGGCCT TCAGACTTTA CTTCTGTGCA TAGTCACGCC CATATCAACG
ATGAGGACTT GCGAGAAGTC TATGTATACA ACCCGTATCA GGCTGGCTGG CTCGATCATT
CCAGGCTCAA AGTGCCAAAA TGGAGAAAAA GTATGGAGTT TACAAGTTTC GTCATCCTCC
TTGCCCTTTT CGTCTCCACT CTTGCCTGTG GGTGAAAAAA AAGTTCATTC TAACGAACTC
CGCGCTTCCG CTCACATCTG TATCAGGGAG GGATCTCCAC CATCTCACTG TGGTGGAGAT
TATCTATATT GTCTTTTCTT TCGGCTTCAT CCTTGACGAA TTTGCAGCTT CCAAAGAGCA
TGGTTGGGCA GGTACGTTTT GGCTTGGCTA CTTGATTCAC GAGTCAGTTG GATCTCGTCT
GATAAATCAA ATGTGTAAAC AGTCTATGCT GCAAATGTAG GTTTCCTTGG TATACCCGAC
TGACAGACAA AACGCTCATA TCTATAGGCT TGGAACGCGT TTGATATGGG ATACGTGAGC
AGCATACAAC TATTTTTCGA TTTTCCTTTT TCCGCTGACA GCCTATATTG AACAAGATTG
CCATATTCCT CTTATACTTT GGCCTTCGAG TCATTGCTCT AGCTTCTCAT TCTACCAAAT
CATCCGACTT GGCATTTGAC ATTTTAGCCT GTGCTGCGTG CATCACCTTC CCACGATTAG
TATTCTTCGT GATCAAAGAG AATGTCGTCA TTCTTGCAGT GAGTCTTTAA ATCTTCAAGC
TCGAATCAGG ATTAGATTCT CACCCTTTTT TTTTACTCAT TTTTTGGGTG TGATCAGCTT
CGAGGCATGG TGGCTAGTTT TGTCAGCTTT ATGACTGTCA CCAGTAAGAA TCTAGATAAC
ACTCTGACAC TTGTCGCGAA CTGACTTTTT ACACCGTAGT TCTGGCATTC ACTGGCATAT
GTTTTTGTCT CTGGACCCTG GGACGTGCTA CATGGACTGT GAAGCAGATT GTATGGCTGA
TGGCGTGAGT ATCGTCTTTC ATGACAGCCG AATACAATTA ACGACCGACA TGGTATCTTT
TACAGTCAGA TCTGGGTAAG TCAGATCGCA CCACCCTTCG CCATTGTTTC TCGAAACTGA
TCTTGTTGAA TGATTGCCAG TTTGGATCCT CATACCTCGG TACGTATTAT GCCGTGCATG
AGATACTTTT GACTAACCCG TCAATAAAGG TTTCTCTGCG AGCGAATCCT TTCATCCGAT
CTTTGGCCCC ATCGTGCTCA TTTCTTATGC GTATGTCTCT TCTCACAGAT CAAAATCCCG
TTATGATCAG CTCATAGTAT CGTAGTGCAC TGTGTAATGT GCTTCTGATT ACAATGCTCA
TTGCCATTCT CTCAAACAAG TTTGCTGCTA TCAACCAGAA CGCTCAACAA GAAGTAAATG
AAAACTCTGC TTGCTCCTGG CGTCTTTTTT TTTTGTCCAA CCTGCTCACT GACTTGTTTT
TTAGCACCTT TTTCAAAGAG TGGTCAAAAC GGTTGAAGGA GTCAAGACCG ATGCCCTCTT
CTCTTACCTC CCGCCTATCA ACATTCTTGC CTTTGCCATC CTTGTGCCTC TCAGCTGGAT
TGTTTCAGCT CGGACTTTGC ATCGGATCAA CGTCTTTGCC ATCCGCTTAA CTGTCAGTTT
TTATTCCTCT TTTTCTTTTT CCCTTTTTCT CTCCCCCCAA AAGTCATGTC AAACTGACAT
ACGATTCATG ATATCAGAAT TTTCCAATTT TGATCGCCAT CTCAGCGTAT GAGAGATACA
CTTATCGCGC CAAGCAGAGG GCCATTCACC TTGGGGCCTC TACGATGGAT CGGGGGGGTA
CGGATGTTCA AAGGCCCAGT CTTCTCGAGT AAGCCCTCCT CCACTCCGCT CAAAACCAAA
CAAAAATCGT CCTGACTTGC GAGAAACAGT TCATGGCTGG GAGGCGGATC CGAATTCCTC
ATCGCCTCGG CCTTTGAAGT CGGCCCGCCC GTTTTTCCTT CCCCCACCAG CAGCGCCAAT
CAAAACTCAC CAGGTGGGCC CAAAGCCACG ACTATGCCAT TTGTAGAGGA TGACGGGGCA
GCGACCACCA CCACCACCAC TCGGGCACGG GAAGCACCCA TCCTGAAAGC GGTAAAGAAA
GAAAAGGACA AGAAGAAGAT CAAGACGTAT GATTCTCCCC TTGCCAAGCT GTTTGGACGA
CCTACATTCT CTGCTTCGCC AGAAGAAGAA ACGACACTGA AAGACAAGGG TGTGGATAAA
GGTAAAGAAA TCAGAGCGGT TGAACAACAG CAGGTGATTA GCGGCAAAGA AGGAGATGTC
GAACAGCTGA AGAAGGAGGT CGAATTGGTG AGGCAGAGTC AGTTGAGGAT GGAGGAGATG
CTGGCCGGGT TCTTGGCGGG TAAATCGGCG TGAGAAGCAG CATTAGAAAG TATGATCTAT
ATAAAGGATA TGACGGACGG GCAAAAACGA TCTTGATTAA ATATTAGGAT TGATTTTTGT
CTTGTCGCTT TTTTTGTATT GAAAACGATA GATGCAAATG CGGC
 
Protein sequence
MSSLGTAPAA PPQPLPDTVF PLIHEVHAIV THAIDTALDW DQLNSPPVNY TLVRPIVQRF 
APRLEHRANA TGLAESTAPD AGELGASPRP VYQGPSLGEV LYALMANRIQ FITLSAGDLS
SAPLQTCRAA FCELLAIKVL RSQPYAQDEA ALVGQLVHAY CAFEGASDEV WASLGEDRKD
VEEMTSSALE LAIVSTSKNL LSLPLIQHLV NLIYSGHLIY SPISSRSIIS DSHAHINDED
LREVYVYNPY QAGWLDHSRL KVPKWRKSME FTSFVILLAL FVSTLAWRDL HHLTVVEIIY
IVFSFGFILD EFAASKEHGW AASHSTKSSD LAFDILACAA CITFPRLVFF VIKENVVILA
LRGMVASFVS FMTVTILAFT GICFCLWTLG RATWTVKQIV WLMAQIWFGS SYLGFSASES
FHPIFGPIVL ISYAALCNVL LITMLIAILS NKFAAINQNA QQEHLFQRVV KTVEGVKTDA
LFSYLPPINI LAFAILVPLS WIVSARTLHR INVFAIRLTN FPILIAISAY ERYTYRAKQR
AIHLGASTMD RGGTDVQRPS LLDSWLGGGS EFLIASAFEV GPPVFPSPTS SANQNSPGGP
KATTMPFVED DGAATTTTTT RAREAPILKA VKKEKDKKKI KTYDSPLAKL FGRPTFSASP
EEETTLKDKG VDKGKEIRAV EQQQVISGKE GDVEQLKKEV ELVRQSQLRM EEMLAGFLAG
KSA