| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB03280 |
|---|
| Symbol | |
|---|
| ID | 3256115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006684 |
|---|
| Strand | - |
|---|
| Start bp | 987245 |
|---|
| End bp | 990562 |
|---|
| Gene Length | 3318 bp |
|---|
| Protein Length | 873 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638254972 |
|---|
| Product | transcriptional repressor, putative |
|---|
| Protein accession | XP_568905 |
|---|
| Protein GI | 58262990 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG5175] Transcriptional repressor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CATAGTGTCA AATACCACAA ATCCTATACC CTTAGTAACC AACACGGATC AGAAAACCCC
CATATGCCCC TTCCCTCCAT ACATCCTCTT CCTCCAAACC CCACAACGGG CCACCAGCCA
CTCGCAAGCC TGGGTGGAAC AAGGTCAACT ATACACCCGC CACCCGCGAG TACATCCAGC
GCTGGTGTCA GCAGAGAAAC GCTTAAAAGT CTTCAAGATG TCTACTGGAG TGATGACGAG
GTGCGTGCAA TGTCTTAGAA TTGCTGGACG GAAAACAGAC GGGGGGCGTC ATGGGGACGC
GTTCTGTCAT GTTCGGCAAC AACACATCGA GATGTAGATC GTTTGGTTTT GATCCTCATT
TTCACAGAAT GGAATGTCAT TATAAGATAC AGTCTCGCTA ATAGTGCTGT AGGATGACCC
CGATTGTTTG CTTTGTGCAG AACCCCTCGA TTTGTCAGAT CTTAACTTCA AGCCTTGTCA
GTGCGGTTTA CAGATCTGTC AGTTTTGTTA CAACAAGCTG CTTTCCACCG ATGCTCGATG
TCCAGGCTGT CGTCGGACAT ATGATACAAA GGCTGTCGTT TTTCAACCTG TTGACTGGGA
AGAGTAGGTC ATCTGGACGG TCTTTCCAAC TGATCATCCT GCTGATTATC ATGTTACCAT
TAGGGTAAAA AAGGCAAAGG AGAAAAAGGC AAAAAAGGCA AAAACGATCA AGCAGTTGAC
TGGTATTGGT CGTCGGCATC TCCTTGGGGT TAGAATTGTC ATGAAAAACA TGGTATATGT
TGTAGGCATG AAACTTCCTG CTATAGGCGA CGAGGTAAGT CAACATAGTA TAAATCCCTG
TTTCGCTGCT CATAGATTGT CGCAGGCTTT ATCCGTGCTT CGGTCCAACG ATTACTTCGG
TCAATACGGC AAAATCTCTA AGCTATACCT TGCAGACACG AAATCATCAA CCTCCGTTCC
GTCTCTTGGG TCTGATAATT CTGATTCAAC TGGCATATAT ATTGTGTATA TCCGACGAGA
AGATGCCGCT CGGTGTATCA CTTCCCTGGA TGGGATTCCT GCTCCGCAAG GCCCTCCTGG
TGCCGTTTTG AAGGCGTCAT ACGGGACTGC GAGGTATTGC GAGACATTTT TGAAGGGTGC
AAAATGTGAT AACTCGAACT GTCATGGTCT GCACGAATGG GGAGGCGAAA GCGACACTTT
CACAAAAGAA GACATGGAAA TTGCGTACGT ACCATGTATT ATGGAAGTAA CCATTGCTGA
GCTCGATGTA GCTTGACGCG GCCGTCGGAA TACGATGCAA GACAAAAGCA GCAAAGTCAG
GCTCAACCAC AACAGACAAT TCCCTCTCTG TCATCCAAAA TCGCTTGGCC CAAACCTTCA
GGCGAGGACG GTCACTCAGG TGAGTTTTTC GTCTTTTGAT ATCTGGTAGT TCTAATGTGA
TTAGTTTCCT CGGCAACCGG CCTTCCAAGC GCTGCCAGTT GGGGAAAAGG CATCGGTGCA
AAGATATCTG GTCGCGGTTC CGCTGGCGCC ATTGCCCGAC CAACTAAAGC TAACGGCCTT
TTCCCTCTCA GTAAAAACAA TGCCTCGTTC CCTCTCCCTA CGCCTTCACC TACAGTCCCA
ATCATCATTA AAGAGAAGAA GGAGAAGAAG TCTGCTACAA TGGCCAGAGC TCGGAGTACC
GATTCAACCC AGAGCACTAC TCCGAGTAGT AATCAGACAT CGCCCAAGAG AAAGGCCAAT
GCTTTGCCAA ATTTAGCGAC TACAAAGTCA ACTACTTCAT CTGCTCCTGT GCCTCCTTTA
TCGCGAAATA TCGTACCCTC AGCATCTGCC TCAGTCCCCG TCCTCGCCCC TTCATCTCCC
GCTCCTGCTC CCGAAACGGA GCCTGTCTCG GAAGGCACGG ACGGGTCTGC CGACGAACAT
TTGTCGGCTG AGTCTGATGC TGGCCCTTCG TCCGAATCCC CGGCCCCACA GACGCCCGCT
CATATCATTG AAAACATCCC TCCACCTCCT GTATCCTCAG AGCCCATCAT CATTCACTCT
CCTTATCCTG AACCTGTCAT ATTCCCTTTC CCCGCGGACG ACAAAGACTT CGCGTTCGTG
CTTGGTTTGG ACGATAGGGA GCTACAGAGA ATGCAAGCAC AAGCGGAAGG ATACGAGCCT
AGCCCATTCA GCAAGACTCT CGAAGGATTG GCTGAGCTAG GTGTCCATGC GCCCGAGATT
CCTGATTTAT TCGTTGCACC AACGTCTCCG CCAGTTGACC ATTACTCTGG ACTGTTCAGG
CCTTTCGAGG CTGACGAACC TTCCCCGGCA ATGTCGAACG ATACGCCCGG ACCTTCACGC
ATTTCTGAAG ATGACCACAA TGCTCAACGC ACTGAATCTC GGTTTGGTTT CGCTCGAGGA
TCAGTCAACG TCTCTGCCCA AAGTCCTTTC AGCAACGGGC GACGTAGCGT AGCAGATCTA
AATTTCCGGG ATGGGTGGTA TCGCAACAAC GACGCGTCTT TGTCCTCTCA TGCTCAACAT
GATGCTAACA ACGGAGCGTT CGCTGCTCAG ATGAACAACA ATTTTTCGAG CAGTTATGAT
TCGACCGCTG GAGTAACAGA GAATGGATGG AATGGCGAAT CAGTCTACAG TGCCTCGCCC
TCCCTGCAGA GGCAAAATGT GGCGACAGTC GGATTGCATG GATATGAAGT AAGACCGAGC
GGAAGGCTGG AGCAGACGCT GTTGCAAGGT CAATATATGC AAAAGGGAAT AAGAGATCGA
GAAGAATACG ACAATAGTAA GTTTGGGCCG CACTTGGCTA TGATAGAATA TTGACCACTA
CAAGCCCTTT TAACAATGCT TCAATATGGC AATCCCCCAC AATTGTTTTC ATCCCAACAC
CACCAGCAGC AACAGCAGCA GCAGCGTGTC ATCTTCTCTC CTGATTCAAC ATCTCATGCT
TTACAGGAGG ATGGACCTTT TCAATCTCCG ATGGCTTTCA GCCAATTGCA GCAGGCTCAA
CAAACACCAT TGCAGCATCA TCCGGATGCA AGACAGCTGA TGCAAATGCA CCAAAGGAGA
GGTCAATCAC CAGCGCCCAT GGCTGCTCAT GGTGGGTTTT TTTTCTTTCC TTCATCTTCA
TGTCGTATAT GCGCTACCTC TAATGCGTGC TACTAGGCTA CCGTCGATTC TAATCTACTA
AATTCTCATT GTCGAACCCC ATCACATTAT TCAATCTCTT CAACGCCTTC ACATTCACGC
TTCTATTCCC GCCAATACCA AATTTCCATC ACATCAGTCT TTTGACTTTG TTTTAATGCA
TGCCACAGTT GGTCACTT
|
|---|
| Protein sequence | MPLPSIHPLP PNPTTGHQPL ASLGGTRSTI HPPPASTSSA GVSRETLKSL QDVYWSDDED
DPDCLLCAEP LDLSDLNFKP CQCGLQICQF CYNKLLSTDA RCPGCRRTYD TKAVVFQPVD
WEEVKKAKEK KAKKAKTIKQ LTGIGRRHLL GVRIVMKNMV YVVGMKLPAI GDEALSVLRS
NDYFGQYGKI SKLYLADTKS STSVPSLGSD NSDSTGIYIV YIRREDAARC ITSLDGIPAP
QGPPGAVLKA SYGTARYCET FLKGAKCDNS NCHGLHEWGG ESDTFTKEDM EIALTRPSEY
DARQKQQSQA QPQQTIPSLS SKIAWPKPSG EDGHSVSSAT GLPSAASWGK GIGAKISGRG
SAGAIARPTK ANGLFPLSKN NASFPLPTPS PTVPIIIKEK KEKKSATMAR ARSTDSTQST
TPSSNQTSPK RKANALPNLA TTKSTTSSAP VPPLSRNIVP SASASVPVLA PSSPAPAPET
EPVSEGTDGS ADEHLSAESD AGPSSESPAP QTPAHIIENI PPPPVSSEPI IIHSPYPEPV
IFPFPADDKD FAFVLGLDDR ELQRMQAQAE GYEPSPFSKT LEGLAELGVH APEIPDLFVA
PTSPPVDHYS GLFRPFEADE PSPAMSNDTP GPSRISEDDH NAQRTESRFG FARGSVNVSA
QSPFSNGRRS VADLNFRDGW YRNNDASLSS HAQHDANNGA FAAQMNNNFS SSYDSTAGVT
ENGWNGESVY SASPSLQRQN VATVGLHGYE VRPSGRLEQT LLQGQYMQKG IRDREEYDNT
LLTMLQYGNP PQLFSSQHHQ QQQQQQRVIF SPDSTSHALQ EDGPFQSPMA FSQLQQAQQT
PLQHHPDARQ LMQMHQRRGQ SPAPMAAHGY RRF
|
|---|
| |