Gene CNB01900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNB01900 
Symbol 
ID3255788 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006684 
Strand
Start bp557559 
End bp559141 
Gene Length1583 bp 
Protein Length432 aa 
Translation table 
GC content48% 
IMG OID638254839 
Producthypothetical protein 
Protein accessionXP_569120 
Protein GI58263420 
COG category[S] Function unknown 
COG ID[COG3752] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.525027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GGAAGCTCAT CATTGAACCA CCAATAGCCC TTACCTAGCC ATGCCCAGTA AGCTACTCTT 
GCCCTTGTTG AAGCCCACAC TCCGCTCCTT CCGTTACATC CCCACTTCAC TCATTACGCT
CCCCGCATCC GTCGGCTTGC ACTTCACCTC TCACCCGGCT CCCACTATTT CAAACTATGT
AGTTTCTCCT ACCACCAGCC CCCTACATCT TCCCTTAATC TTCACACTGG CATCCATCCC
CATATTCTAC CTGCTAGGTT TGGTGACTGG TAAGGTGAGC TGGGTCGACA AGGCGTGGCC
GCTGTACCCT CCTGCCATTT CTGCAATGCT CTACGGATGG GTTCTGGTTA ATCACGCTGG
AGGAGTCTAT GCCCATAACA TTCCAAGGGT CACCTTCATG TTTGGTCTTC AAGTACGTCC
CCTTTTTAAA TGATCTGTGT CATCCACATT AACCTCTTAT AGCTCATATG GTCATTTCGC
CTATTCTCTC ATGCTGTCAA AAGAGGCTTT TACAATCCGA AATCCGAAGA TTATAGGTAT
ACAGTTTTCC GCAAGCTTGT CCCCCGTTGG GCATTTGCCC TTGTCCACGC GTTTGCTGTG
GCTTTCGCAC AACCTATACT GCTCATGTCA TTGAGTCTTC CGCTTTACGC CGCACTTGTA
TCCCCTCCTG CATCCAAGCA GACTGACGGA TGGCGGACCC TCACATTTGG GAACATATCA
CGACTCCTTC CCTCCCATCT CCGAAAAGCT GTACCACCGC ATATTGCGGT ACTCAACATG
TCCGACTATA TCATGACCAT GGTCTCTTTG CTCATCATCT ACGCTGAATA TCAAGCAGAC
AAGAAGATGT ACCAATTCCA ACAAGGGAAA CATAATAAGA TTTCATCCCT GTCCAAGGAG
CAACTTATAC ACCCCCCTGT CCCCCAATCT GGTGAAAGCC AGCCGCTTGT CCAGAAAGAA
GGTTTACCGA AGCCTTCACC ATATCCCGCT TCTCATCACC CAGGTTTCCC AACACAAGGA
ATGTGGCGGT TCTCTCGACA CCCAAATTTT GCAGCAGAGC AGTTGTTCTG GGTATCTCAA
GCTATGTTTC CCGGGCTCTC AGGGAAGGAT AATGGGATCA GTGGTAAAGG GTGGTGGGCG
GGCTGCGTCT TTGGACCTTG TTTCGCTTTG AGTTTGCTAT TCCTTTCGAG TACAACGCTT
ACAGAGTGGA TTACTGGAAT AAAAGTAAGC TTTTGATCCC CTTCAGGTGT GCAGAGGGTA
TAAATACTGA CTAGTTCCCG CCAGTACCCC GCGTTCAAAA ACTATAAAGG AATTGTAGGA
GAATTTTTGC CACAAGAAAC GTTATTCAAG TGGATCTGGA CGAAGATCAC AGGCTCGAGA
GAACGTCTGT ATCAAGCAGT TTACGGGCCT CCTCCGGGTG AGAAACAAGA CTCTTCAAGG
TTAAGATAAT AAGCCCTATG TGTCACTACC TTACTCTTTT CAGTCATTAC GGGAAACAGT
GTAGAGGCAC CAGTGTATCA AATGTTACAA GTATGATGAG GACGACTGCT CTGTGTTTCC
GGTGCTCGCA GATCTCTATA AGT
 
Protein sequence
MPSKLLLPLL KPTLRSFRYI PTSLITLPAS VGLHFTSHPA PTISNYVVSP TTSPLHLPLI 
FTLASIPIFY LLGLVTGKVS WVDKAWPLYP PAISAMLYGW VLVNHAGGVY AHNIPRVTFM
FGLQLIWSFR LFSHAVKRGF YNPKSEDYRY TVFRKLVPRW AFALVHAFAV AFAQPILLMS
LSLPLYAALV SPPASKQTDG WRTLTFGNIS RLLPSHLRKA VPPHIAVLNM SDYIMTMVSL
LIIYAEYQAD KKMYQFQQGK HNKISSLSKE QLIHPPVPQS GESQPLVQKE GLPKPSPYPA
SHHPGFPTQG MWRFSRHPNF AAEQLFWVSQ AMFPGLSGKD NGISGKGWWA GCVFGPCFAL
SLLFLSSTTL TEWITGIKYP AFKNYKGIVG EFLPQETLFK WIWTKITGSR ERLYQAVYGP
PPGEKQDSSR LR