Gene CNB01060 details

Gene Information

• Locus tag: CNB01060
• ID: 3255816
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006684
• Strand: +
• Start bp: 324114
• End bp: 326135
• Gene Length: 2022 bp
• Protein Length: 607 aa
• GC content: 49%
• IMG OID: 638254757
• Product: conserved hypothetical protein
• Protein accession: XP_569112
• Protein GI: 58263404
• COG category: [J] Translation, ribosomal structure and biogenesis; [K] Transcription; [L] Replication, recombination and repair
• COG ID: [COG0513] Superfamily II DNA and RNA helicases

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.0340674
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGAGAA GAGATCGAAT GAGAATTTCG ACAGCGCAGA AATTTGGCTG GGGGTCCCAG 
GCACAGACGG GTCGGCGATT TGTTTTGCGT ATATTTATGG TGATTTTATC CCTGGAAAAG 
TTGCGGCAAG GTAGTCTTCT TTGCATGACT CCATCTCACG GTAACGCACA CAGTTCCGCA 
CACCGCGCCA TGTCATCCAC AAAGCCTCCC ACCACCACAA ACAAGCGGAA GCGCACCTCA 
AACGCCCACG ACGAAGCCCC CGCAAAGCGT GTCCCAGAGG CCTCCTCCTC AAAAGTCACT 
CTCGACGACT CGCAGCCCGC CCCTGCCACT TCCTCAGATG CTGTACTCGG CGCCAGGTCC 
GCTCCTGGTA CTGACTACGA GCGGGTCCCC TTCTCCACCC TCAACCTTTC TCCACCTACC 
ACTGCTGCCA TCGAGCGTAT GGGTTTCGAG ACTATGACAG AAGTCCAGGC CAGGACTATC 
CCTCCTCTGT TGGCCGGTAA GGATGTGTTG GGAGCAGCAA GGACTGGCAG CGGAAAAACC 
ATGGCATTCC TGATTCCCAG CGTGGAGCTT TTGAGCACTT TAAGATTCAA GCCCGTCAAT 
GGTGAGTCTT AATGGCCTTT GGCAAATGGC ATGGCTAATC GCCCTTGAAG GAACTGGTGT 
CATTATTATC TCTCCTACGA GAGAACTCGC TCTTCAAATC TTCGGTGTTG CCAAGGAGCT 
CATGCAAGGC CATTCACAAA CATTCGGTGT TCTTATGGGT GGTGCGAACC GTAAGGCAGA 
GGCCGACAAG CTGGTCAAGG GCGTCAACCT CATCGTTGCT ACTCCCGGTA GACTCCTTGA 
TCATTTGCAG GTACGTGCAT CCTATGTCTG TTGACGGACT CGTGCTTATT GAGATCAGAA 
CACAAAAGGA TTTGTTTTCA AGAATCTCAA GGCTCTTGTA ATTGACGAGG CTGATCGAAT 
CTTGGAAATC GGTTTCGAAG AAGAAATGAA ACAGATTATC AAACTCCTTC CTTCCGGTAA 
GTTACCGTGC TGATAGGCAG CATTCGCAAG CTAATCTATC CCCCCTTAGA AAACCGTCAA 
TCAATGCTTT TCTCCGCTAC TCAGACCACC AAAGTCACTG ATCTCGCCCG TATCTCGCTT 
CGCCCAGGTC CTCTCTACAT CAATGTAGAT GAAACCAAGG AAGCCTCTAC TGCAGACATG 
CTTGAACAGG GCTACGTCGT ATGCGAATCC GATCAGAGAT TCATGCTCCT TTTCACATTC 
CTCAAGAAGA ATTTAAAGAA GAAGGTTATT GTCTTCTTCT CCAGCTGTAA CTCTGTCAAG 
TACCATGCCG AACTTTTAAA TTACATTGAT GTTCCTGTCT TGGACCTTCA TGTAAGTTCA 
TTCATAACCA CGCTGAACAT TGCTGACCAG TCCTTGCAGG GTAAACAAAA ACAACAGAAG 
CGTACAAACA CTTTCTTTGA ATTCATCAAT GCCCCTGCTG GAATTCTCCT CTGTACCGAC 
GTCGCTGCAC GTGGTCTCGA CATTCCCAAG GTTGACTGGA TCATCCAGTT TGATCCGCCT 
GATGATCCCC GAGATTACAT CCACCGTGTC GGCCGTACTG CCCGTGCAGG CAAATCCGGA 
AAGTCTCTCC TTTTCCTTTT GCCTAGCGAG CTTGGCTTCC TTCGTTTCCT CAAGGTTGCC 
AAAGTTCCTC TCAACGAATA CCAATTCCCT CAGAAAAAGG TTGCAGATGT GCAGAAGCAG 
CTGGAGAGCC TGATTTCTAA GAACCATTAC CTCAATACCT CGGCGAGGGA TGGATACAGG 
TCTTACCTTC AAGCCTATGC GTCTTACTCT CTCAAAAAGA TCTTTGACGT CAACAAGCTC 
GACCTCGCCA AGGTTGGCAA GGCATTTGGT TTCGCTGTGC CTCCAAAGGT CAACATCTCC 
GTCGGATCCG TCAAGGCGAA GAAGAGCAGA GATGAGGATG AAAGTAGTGA TGATGATGGT 
CAACCCAAAA AGGCCTACTA TAGAAACAGG GGCAGAAAAT AA 

 

Protein sequence

MERRDRMRIS TAQKFGWGSQ AQTGRRFVLR IFMVILSLEK LRQGSLLCMT PSHGNAHSSA 
HRAMSSTKPP TTTNKRKRTS NAHDEAPAKR VPEASSSKVT LDDSQPAPAT SSDAVLGARS 
APGTDYERVP FSTLNLSPPT TAAIERMGFE TMTEVQARTI PPLLAGKDVL GAARTGSGKT 
MAFLIPSVEL LSTLRFKPVN GTGVIIISPT RELALQIFGV AKELMQGHSQ TFGVLMGGAN 
RKAEADKLVK GVNLIVATPG RLLDHLQNTK GFVFKNLKAL VIDEADRILE IGFEEEMKQI 
IKLLPSENRQ SMLFSATQTT KVTDLARISL RPGPLYINVD ETKEASTADM LEQGYVVCES 
DQRFMLLFTF LKKNLKKKVI VFFSSCNSVK YHAELLNYID VPVLDLHGKQ KQQKRTNTFF 
EFINAPAGIL LCTDVAARGL DIPKVDWIIQ FDPPDDPRDY IHRVGRTARA GKSGKSLLFL 
LPSELGFLRF LKVAKVPLNE YQFPQKKVAD VQKQLESLIS KNHYLNTSAR DGYRSYLQAY 
ASYSLKKIFD VNKLDLAKVG KAFGFAVPPK VNISVGSVKA KKSRDEDESS DDDGQPKKAY 
YRNRGRK