Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNB01050 |
Symbol | |
ID | 3255832 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006684 |
Strand | - |
Start bp | 321100 |
End bp | 323894 |
Gene Length | 2795 bp |
Protein Length | 710 aa |
Translation table | |
GC content | 50% |
IMG OID | 638254756 |
Product | hypothetical protein |
Protein accession | XP_569111 |
Protein GI | 58263402 |
COG category | [B] Chromatin structure and dynamics [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG5406] Nucleosome binding factor SPN, SPT16 subunit |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.769238 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | AAGTATCTAG CGAGGGCCGT CAGCGATAAG CTCCCTTTCA AAAATTTTCT TTCAGAGCCA GGTCAGTTCA TTTCCCCTTG AAAATTTTTT CTCCGTTTCC ACAATGATGC CCCGAAAGGG AATTACCGCC TGAGCACATC TTCCTTCTGC GGCGTAGCAA TACGTCCAGA GGTTGGTGGC ATGCTGTTAA AACATGGCTG TTTTATTTTT ACTGATCATT CCATTCTCCG TTACGATTTG GATTCCACAT GACCACCGAG CTAACTCACT GCTGTTAGGT CTCTTGACCG ATCGAAAATT TTTAGTTTCT CTCTCTTGGG GTATCCATTT TTATTTAGAG TAAGTGTTAT TTTCTATCGC TCTACCCCAT CATACTCTAG TCTTTTGTAA TAAGTGATGA TCACAACACG ACGGTCTTCT TACCCAAAAA ACCATGGTGT AAACGCCCGA AACCCATTTC TCCGGGCACC CAATCTGACT CTACCATTCA CTTCTGATTT TGCGTTTAGA ATTGTGTAGA GCTTTGTGCT GACTATTGTT TTCAGCCCTC ATAATGGCTC CACGTCAACC TGTCGCTGGC CCTTCGAAGC CGAAGCACTC GCAGCAGCCT GCAATCCAGT CACCTCCGCC TCCTGCAGCA GTCTCGGCAT TCAACTCCAC TCGCACCTTG TTTGCTCTAG CTTCCCCTGT TTTAGGGCAA GCGGACAAGG TTCAAGTGTG GGATGTTGCG GGTGACCGTG TAATATCCGA ATGGGAAGTA GCTGGTGCTA GTAAGGCTTC CTCTGTTTGC TTTACTACAG TCCCATCGGA CGCCGCTAGT AAGAAAAAGA AGCGGAGAAA GTCTGGCTCT GGTCATGGCG CTGAGGAAGA GGTAGTCCTC GTGACAACGT CAAAGAGTCA ACTTTTGGTT TTGTCTACTA AGCAAACCGA ACCTTTGCGA ACTCTTGATC TCCCAGCTCC TGTAACTGCG GCCTGGTCTG AAGAACGTGC GACAATACTG GCAACTGCTT CCTCTCTTCT TGTTTTATCG GCGGATGCCT CTAGTATCTC TCACACTTTC ACTCTTCCAT CCTCCCTCTC ATCTCCTACT GCCCTCACAA TCCTTCCGAC ATCGACCGCT GAGTCATTGC ATGTACTCGT TGCCTCCTCG CTCGTCGTCA CTCTTCACCT GGGATTGGCG TCTCAGGAGA TCACTTTCGT CTCATCACCG CTTCCTGCAT CTACCTCTTC TATCTCTTCG CTCCTCCCTC TTCCTCTTAC AGAGCAAGGT GCTTCATTCC TTGTCGTGTC GGAAGATGAC CGCACAATAT CTCAATACAC CCTCACGTCA CCCCAGTCCT CCGCGAGACT TTCATACCGC TACGCCTCGC CTACACTATC TTCTGCTCAC TCAATTTCGG CTGATCCAGA TCTTCTCGCC GTATTGCACG AGTCTGGAGA GATTTCTCTT TTCCGCCTTC CGTCTGAGCT TGATCTTTCC CGCCCCCAGT CAGATGCGAA GCCGAGCACT GTAAAGATTG TTGAAGGGAA GGAAGAACGT ACAGCCAGAT TGTGTCGCGT TGCTTTTGCC CCTGTAGATG ATGGAGCATC GGGTGCATTG CTTTGTGGAA GATTGACAGG AGGAGGTCGT GTCAAATGGT CGCGTGCAAT CTTCGAGCTT CCGGAGGGCG GTTTGAGACC CGTTACGGTT GTTAAAGTCG AGGCTCAAGA ATTAGTTGGA GGCTCATCAG CGTCAGAGGT CAGTACGATG TCACTTCTTG TGTGAACCGG TTGCTGATCT TCCTTGCAGA GTGTTCCTGT GCAACGTTTT GTCGCGCCCA ATACGGTGAA TGAAGCTGCT CCCGACGATA TCGACGAGGC CCCTGTCTCT CAGTTGCCTT CTGATGTTAA TATGGCGGAA CTTTCGCTCG GCGAACGCAT GCTTGCACCA GCTTCTCAAG AAGCCGACAG CGGAAACAAA CGCGCAGCCA CTTCAGCCGG CGTTACCCTC GACGGTCCTG TGAATGCAGC TTCCCTCACT CGTGTTCTCG TCCAAGCTCT CCATACATCG GACCCAGCTC TTCTAACACT GTGTCTGTCC CACCGCAACC CAGTTCTTAT TCGCAACACT ATCAGAAAAA TGCCTCCTCA ATTGGCTCTT CCTCTTCTGA AAGCTTGTGT GGAGCGACTG GGCCAAGGCA AGGGCGCCAA CAAACGTGGT GGAGGCCGTG GTGCTGCGCA GAACGAACAG CAAGGTCGCG GCACTGTTGA ATGGGTAAAG GGAGTGCTTG TCGAACGCGG CTCCATCCTC ATGACTATAC CTTCTTTACC TGTCCATCTT GCTTCTTTGT CTCAGCTGCT TCAAAATCGA CTGGAGCTCA ACCAGCCTTT GCAAAGCCTT TCTGGCCGTT TAGATCTTGC TCTTGCCCAG ATTACCATGC GTCGCATCGC TGCTGAGCAG GCTCTGGAGA ATGCCAAGAA CGGTGGACAG AAGGGCGGCG AAGGTGAGAT ATATGTCGAG GGTGAAAGCG AAGATGAAGA TGAGGATTTC ATCGAAGTTG GCGAAGATGG AGGTGAAATT GAGGACATTG ATATGGGTGG ATTGAGTGAG AGCGACGAAA GCGAAGAGGA CGAGGAGGAG GATGAAGAAT CAGATGATGA TCCCCTTGAT TCCGGCTCGG ACAATGATCT ACTAGATCTG CAAGCTGAAG AAGAAAGCGG AAGTGACGAC GAGGACGAAA GTGAAGAGGA GGATTAGTAG CATCATTGTA GTATCTTCAA TACATTTGCA TGTCACATTA GCATTTCCAA TCAGA
|
Protein sequence | MAPRQPVAGP SKPKHSQQPA IQSPPPPAAV SAFNSTRTLF ALASPVLGQA DKVQVWDVAG DRVISEWEVA GASKASSVCF TTVPSDAASK KKKRRKSGSG HGAEEEVVLV TTSKSQLLVL STKQTEPLRT LDLPAPVTAA WSEERATILA TASSLLVLSA DASSISHTFT LPSSLSSPTA LTILPTSTAE SLHVLVASSL VVTLHLGLAS QEITFVSSPL PASTSSISSL LPLPLTEQGA SFLVVSEDDR TISQYTLTSP QSSARLSYRY ASPTLSSAHS ISADPDLLAV LHESGEISLF RLPSELDLSR PQSDAKPSTV KIVEGKEERT ARLCRVAFAP VDDGASGALL CGRLTGGGRV KWSRAIFELP EGGLRPVTVV KVEAQELVGG SSASESVPVQ RFVAPNTVNE AAPDDIDEAP VSQLPSDVNM AELSLGERML APASQEADSG NKRAATSAGV TLDGPVNAAS LTRVLVQALH TSDPALLTLC LSHRNPVLIR NTIRKMPPQL ALPLLKACVE RLGQGKGANK RGGGRGAAQN EQQGRGTVEW VKGVLVERGS ILMTIPSLPV HLASLSQLLQ NRLELNQPLQ SLSGRLDLAL AQITMRRIAA EQALENAKNG GQKGGEGEIY VEGESEDEDE DFIEVGEDGG EIEDIDMGGL SESDESEEDE EEDEESDDDP LDSGSDNDLL DLQAEEESGS DDEDESEEED
|
| |