| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB00610 |
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| Symbol | |
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| ID | 3255702 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006684 |
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| Strand | + |
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| Start bp | 171392 |
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| End bp | 173966 |
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| Gene Length | 2575 bp |
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| Protein Length | 802 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | 638254714 |
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| Product | DEAD box RNA helicase, putative |
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| Protein accession | XP_569071 |
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| Protein GI | 58263322 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.31511 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCGA TAACTCCCTC ATGGGCACTC GAGACAACGG CAGATGGAGA GGTAAAAGAG
AAGACATCAG GTCCAGGCGG TCAATGGCGC GCTCTCAGTA CGTACACCCA TACATCCTCC
TGCTCCTCCA TCACCACGAG CTCACACTCG CACAGATGTT GGACCCGACC TCATCCGCTC
CTTGTTGATA CGCAAATTCA AGACCCCAAC GCCTATCCAA AGAGCAGCTA TCCCTCCCGC
TCTCTCCACT CCACCGAGGG ATATCCTTGG TATGGCCAGG ACCGGTTCTG GTAAAACTTT
GGCGTACCTT ATTCCTCTTC TTCAAAGAAC TGGATCGACA CACCATGGAC AGGGCCCAAG
AGCTTTAATT CTCTGTCCGA GTCGAGAGTT GGCGGTGCAG ATCTATACTG TCGGAAAGGA
TCTTGCTAGA GGGATGAACA AGGGCAAGGG AAAAGGAAAG AACAAGAATG AAGACGAGGA
AGATGAGGAA GGCAAGGGTA AAGAGGGACT GAGATGGGCC CTCATCATTG GTGGTGAAGG
AATGGACGCT CAGTTTGAAA AGATGTCCTC CAACCCTGAT ATGTAAGTAA TTTCCTGTCG
TTCTCTATAA AAAGTGTGCT AACGAAAACA GTGTGATTGC AACTCCGGGT CGATTCCTCC
ATCTTATCGT TGAAATGCAC ATGGACCTTC GACACCTCCA AACGGTCATC TATGATGAAG
CCGACAGACT TTTTGAAATG GGTTTCGATG TCCAACTTCA AGAAATCCTT CATCGTCTCC
CTTCGACCCG TCAAAACCTG TTGTTCTCTG CTACTCTCCC CTCATCCGTG GCCGAATTCG
CAAAGGCCGG TCTCGTGAAC CCTCTCCTTG TTCGTCTTGA TGCCGAGCAA AAGATCTCAC
CTGATCTCGC CCTCAAATTC TTCTCTGTCA AACCCGGAGA AAAGGAAGCG TCTTTACTTG
TTCTTTTGAG AGAAGTCATT GGCAAACCCA ATCAACCTGA GCCTGCCGAT CCCTCTTCTG
CCCCTCAGGC TATCGTCTTT GTAGCTACCA AGCACCACGT CGACTATGTC GCCGAGCTTT
TACGTACGAC CGGGTACCGC ACCTCTCTCA TTTACAGTTC CCTCGACCAA GTTGCCCGTC
AGCAGCAACT TGCCGGTTTC CGTAGTCATC AATCCGATGT CCTCGTCGTC ACAGACGTGG
CTGCCCGTGG TCTCGATATC CCCATCATGG ACCATGTCAT CAACTATGAT TTCCCTGCTG
GTCCTCGTAT CTTTGTTCAT CGTGTCGGTC GTACGGCACG AGCCGGTCGA AAAGGTACCG
CGTACTCCCT CATCGTCAAG GAAGATTTCC CTTACCTCTG CGACCTCCAT ACCTTCCTCG
GCACGGAGCG TATGGGCGAA CCCGCAGACG TTCTGCGTTC ACTCCCTATT GAGCAGCTTA
GTGAGAATGT CGAGTACGTT TTCCATAACC TTGACGAAAC TGCACCCCAT ATTACTGCTT
TGCGTAACGT CATGCGCAAA GGTCAAGGCA TGTTTGAACG TTCTCGTACT AAAGCCAATC
CCACGTCTTA TCGTCAAGCG AAATCTCTCG CTTCCGCTCT CAGTAATAAT CCTCCCCGAA
TTGATGACAT GTTTGAGGAT GCGATGGAGG TTGAGGTGAA TGAAGAAAAG GCTAGATTAC
TCGCCAAAGT GGCAGCGTTC ACACCGTCTG AAACTGTGTT CGAAGTCGGA AAACGCGAGA
GTGAGAGCGC GATTATCATG AAGAAGAGGA GAAAGACAGT CGACGAGAGG CAGAAACGAG
TCTCAAAGGC TGAAGCAGAG AAGAGTACAG CGAGCGGTAT GGAGAAGGCC CCCGTGAAAG
AGCTTCCCGC ACCTCAACTT CCTAGCAAGA ATTTTAAAGA CCCTTCCTTC TACCTCGACC
ATACCCAACG CGGAGCGGAA GCTGAAAAGG GTTACTCTCT CAAATCTGGC GTCGAATCTC
TTTCTGGCGC GATCACTGAT ATGACTGCCG ATGAAGGTAC AGGACCGAAA GCCCAAAAGG
CCAGTCAACT CAGTTGGGAC AGGAAGAAAC ACAAGTTTAT CAAGAAAAAT GGTAGTGCTG
ATGGAGAAAA GATGATCAAA AGCGAAAGTG GTGCATTGTT GCCTGCTAGT TATAGTAGTG
GCAAGTATCA GGAATGGAAA TCGAAGAGAA GGCATATGCC TGATGGGCCG GTGGAGGCTC
TGGCTTTGGG AGGTGGCAGG AGGGGAAGAC ATGGACCACC GGGACAGAAG AGAAAGGCAG
AAGATGGAGA TGGGGGAGAG GATGCTGGTG GAAAGGGTAG GAAGGATCAA GGAAAGAGCA
AGGGCACGGG TAAGGGCAAG GACGATTTCA AGCAGAAGTC TCCTGGAAAG CCTGGCAAGA
AGGGGATCAA GCAGTCCTCT GGGCTCAAAT CTGCAATGGA TATCAGGAAA CAGAGGGAAA
TCGCGCAAAA GGTTCGTTGT ACTGCGACTT GCGATATTTT GAACTTTGCT AACGGGTCAT
TGTACCACAG AGAAAAGAGA AGAACGCTCG AAAACCCCAA AAGTTCAGAA AGTAA
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| Protein sequence | MAAITPSWAL ETTADGEVKE KTSGPGGQWR ALNVGPDLIR SLLIRKFKTP TPIQRAAIPP
ALSTPPRDIL GMARTGSGKT LAYLIPLLQR TGSTHHGQGP RALILCPSRE LAVQIYTVGK
DLARGMNKGK GKGKNKNEDE EDEEGKGKEG LRWALIIGGE GMDAQFEKMS SNPDIVIATP
GRFLHLIVEM HMDLRHLQTV IYDEADRLFE MGFDVQLQEI LHRLPSTRQN LLFSATLPSS
VAEFAKAGLV NPLLVRLDAE QKISPDLALK FFSVKPGEKE ASLLVLLREV IGKPNQPEPA
DPSSAPQAIV FVATKHHVDY VAELLRTTGY RTSLIYSSLD QVARQQQLAG FRSHQSDVLV
VTDVAARGLD IPIMDHVINY DFPAGPRIFV HRVGRTARAG RKGTAYSLIV KEDFPYLCDL
HTFLGTERMG EPADVLRSLP IEQLSENVEY VFHNLDETAP HITALRNVMR KGQGMFERSR
TKANPTSYRQ AKSLASALSN NPPRIDDMFE DAMEVEVNEE KARLLAKVAA FTPSETVFEV
GKRESESAII MKKRRKTVDE RQKRVSKAEA EKSTASGMEK APVKELPAPQ LPSKNFKDPS
FYLDHTQRGA EAEKGYSLKS GVESLSGAIT DMTADEGTGP KAQKASQLSW DRKKHKFIKK
NGSADGEKMI KSESGALLPA SYSSGKYQEW KSKRRHMPDG PVEALALGGG RRGRHGPPGQ
KRKAEDGDGG EDAGGKGRKD QGKSKGTGKG KDDFKQKSPG KPGKKGIKQS SGLKSAMDIR
KQREIAQKRK EKNARKPQKF RK
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