Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNA05930 |
Symbol | |
ID | 3253262 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006670 |
Strand | - |
Start bp | 1585438 |
End bp | 1590107 |
Gene Length | 4670 bp |
Protein Length | 1382 aa |
Translation table | |
GC content | 51% |
IMG OID | 638252913 |
Product | snoRNA binding protein, putative |
Protein accession | XP_566946 |
Protein GI | 58259067 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.192675 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AGAAGACAAC CGCCAAAATG GTAAGTTCAA ACCTTTCCTA ACAGCCCATT CTCACCCACT TCTAGAAAAT AAAAACCATC TCTCGCTCCC TGGACGATCA TCTTCCCTCT TCCTCCTCTG CTCCCCATCC TCTGTCGCAC AACCTCGCGC CTCATCTCCA TCCTTTTGCA AAGCCAAGAG AATACACACG TGCCGTCACT GCCGTAAAGA TGGAGCGCAT GTTTGCCAAG CCTTTTGTTG ACGCTCTTGG TGGTCATCAG GACGGTGTCT ACTGTCTGGG TAAAGACTCG AGACGGGCCG GCGTTGTTGC CGGTGGTGGT GGCGATGGCG AAGTCATTGT ACATTCCTTG GGCTTGAGGA GACCATTGCT CAAAATCCCA GGAGCCCATA GGGGTATGGT CAGTGGTATA TGCTGGACGT CTGAGGCGCA AGACCGTCGG CGAGGACTGA TCACCTGCGG CAAACTTGAC GGCACCATCA AACTTTGGCG AAGCGAGGCG TTTGCCCCTG GTTTGAGAGA CAAGGATGCT TTTCAGGGCA ATGAGTTTGG TCTTGGACAA GGTGAAGGAA GTGGATTTTT GGACCAGGCC GGAGCGATTG GAGAAAGCGG GTATGATGAG GAGGAAGGCG GAGGCTTGTC GCTTGATTCG GCAAAGAGGG ATGCGTTGGG GCAAAATCTT GAGCCCACGA TGACTTTTAC ATCCAAGAAC GGTTTAAACG GCATCGATCA TCACCGTACA GATGCGGTAT TTGCTACTGC TTCAAACACT GTGCAGATCT GGGACGAGCA GAGGACGGCA CCATTAAGTA CACTTCAGTT TGGAAGCTCA ATGGAGACAG TGTCTGGCGT CAAGTTCAAT CAGAGCGAGA CTAGTGTGCT GGCAAGTGTG GGTAATGACA GAACAATGTG TTTGTACGAT ATCCGAACGG GCAAGGCCGA GAGACGTATT GTTACCCAGG TGGGTAATAT TTTCCTTCAT TCATTGCGGA GGGATTCGTG CTTAGCAATA CGCAGTTCAC GTCCAATTGC CTCTCGTGGT GTCCCACTCT CCCCACCCTT CTTCTTCTTG GCTCAGAGGA TCACAACCTC TACACGTTTG ACATTCGTAA CCTGGAAACT CCTAACCAAA TTTACAAGGG CCACGTCGGT GGTGTCATGG GATGCGACTG GAGCCCGACG GGTGAGGGAT TTGTCTCTGG GTCCTATGAC AGAACTGTGC GGTTATGGAA CAGAGAGGAA GGCAAGTCAA GGGACGTTTA CCACACCAAG CGGATGCAGA GGTAAGTTCA AGTTTGACGT GATTTGCATT TTATATGGAC GTATCCTAAT AATTACTGCA GAGTATTTGA CGTCAGCTAC ACTCCCACTG CCGACTTTGT TCTCTCCGCG TCGGATGATG GCAATGTGCG CATATGGAAA TCGGATGCGT CCAAGAAACT CGGCCCTGTT TCGACCAAGG AGCGTCAAGC TATTGAGTAT CGACAAAAAT TGGTGGAGAG ATACGCCCGG GAGAAGGGAG TCAGGGAAGT CAAGGAGAGG AGGCATGTGC CGCAGAGCAT CCACAATGCC ACAAAGCTGA AGAGGGAAAT GATAGAGGCG CGGAATATCA AGGAGGACAG GAGGCGGAAG CACTCACGTG CTGGGCGGGA GAAGCCGAAG GCGGAGAGGA AGAGTGAGTT GGCTGTTGTG GTGGTGGGAT GTGTGCTGAC GCTGTGCAGA GACTGTGGTT GTGGAGCAGC GGTAGGGGGG GCGTGGTATA TAGAATGTGT TCATAGGTGG TGTGATGTAT GTGCAGTATA TATGGCGTGG TGTCCGGATC TGAGTGGGTG CGCCAGGCGG GCTGTCCTGC TGCGTGTTTC AGTTTCTGGT CCCATCTCAT CCAGTCATTC TCTTGTCCAT CTTGTCTTTT TGCCCTCTCA TCCACTATCC TCTTATCCAC TCATCCATAT CGCCCGCATG TCGCTCTTCG GCCAGATCAA GCGGCACAAC CCTGCAAAAC CACGCCGCTC ACCCCTCCCC ACCTCAGCAT GGGACGACGA CCGCCGCTTC GGCCTCTCTG GCCCCTCTGC ATATTCTAGA TGGTTCACCA CCCTTTACAT CCCCCTCCGC CTTCCTTTTG GCCACCCATC CGACTCTCAC TCCCTCTCCT CGGGCTCATC CCTAGGATCC CCAAGACCCT ATCACGCAAA GCCCAGAACT CGCCATCTCA AAGTCTACCT TCCCATTCCA CCTCGCCTCT ACGCCCGTAT TCCGCGCCTC AATTCTCCCA TTCGTGTCCT TTTGCTACTC GTCTTCAGTG TAGTCGTGGG CTTCTTCCTT CTTGGGTTCA GAAAAACAAG ACAGGGTGAA AGAACGTGGT CTCCTCCGTT TGTGGACCCA GATACAATGG TCATTACACC GGAAGAGGCA GCGATGGTAT GGGAATGGGA GATCTTGAGT GGGCACTATC CGAGTATCGA ACATCGTATG CCATCAGTAC TTTTTCCCTT TCCACATGCT GACTTGCTGC TTAGCTCCCG ACCATCTCCC GCTTTATCCC TCCCTCAAAA ACCCTGTCGT ACCCGCGACA CTCCTCCCTT CCCCATCGTC CCCAACCCCT TTAGTCGCAT ATCAAAACCG TGCAGACAAA TTCCCTTCCG CCCATTTGGC TGGAAACGGC CCCGAGCGAC ATTATCTGTC TGTATGGGAT ATGCGAGAAA GTCAGCCTGG ATTCCCGGCA AGGCCTATGC CGGGGTCCAT CTTGGATCTG GACTTAGTGT TGGAAAAGTG CGATCTTGGC ACCAACAAGG TGAGTTGTTT CTCGTTTTAT CAAGGTGAAG CTTATCAAAC TAGTACGTGC GAGATTGTTT GGAATTCCTG AGGATTGGAG GAGGTCTTGA CATCGGCAAA CGGGTGCGAA GAGGCAACTA TTTGACTCAG TATAAACAGC TCTATTATGA GGAATCCACT CCTTCCCAAT CTCTCTCCAT GATGCCTCGC AACCTTAAGC AATCGACCGG CCGATCCAAA ACCCCTCTTA TCCTTCCCGA TCCCTACGAT ATCCCAGCAA GTTTCGACTC CCGTGACGCT TGTGATCCTT TGCACCCCAG GATATTCCAC ATATTCTGGA CAGGACCGTT CACAGATAAG CCATACATGG CTGTCATGTC CTTCCTCTTT ACTCAGAACC TTGGGCTCGA CAAGCCAGTG GATGCAGTGT CTGATACTGC AAGCGTCGTT CGCGGGACTT GTCGACCTCA ACTCTGGTTG TGGATCAACC CTGGTCCTGC TGCTGCCGTA CCCAATCCTT CAGCTAAAAG AGAAATGTAC GAGCAGTTGG CTACAAACCC ATGGTCTGCG CCTTTCTTGC ATGACAGATT TAGGGACGTT GTCAAATTCA AGATGTGGAA CACCACTGAA CAGCTGGATG GTGTGGCTGA ACTTAAGGAT CACTGGCGAA AAATGCCCAT CTTCAACTCG GGCGGAAATA CGTATGGCGA TCCAATGGGA AAGACCGAGG ACGAAGTCAA TGAAGAAATC GAAGACGAAT CAGGCAAAAC TGCCTCTCCC AAAAAGAAGG GTGGCCTTTT CGAAAAAGTT GGCTCCTCCT CAGAATCGGA CTATGACCGT TTGTCCGTCA TCCTCTCCGA CATGGCACGA TTTATCGTAA CTCATAGATT TGGCGGTATC TATCTCGACG CTGATACCAT CTTCCTTCGT GATTGGGAAG AACTGTGGAA CTACCGAGGC CAGTTTGCCT ACCGCTGGTC ATGGCACGAA AAATACAACA CTGCAGTACT CAAGCTCCAC AAAGGCTCCG CTCTCAGCAC GTTCTTGTTC AAGACGGCTT TGGAGAACGG ACTAGATTTC CACCCCATGA CGGTATCGAG GTATCTGAAA GATGCCGGAT TGGAAAAGCT TCTATTCAGA GTGCCCGATG CGTTGTTTGA CCCGGCTTGG TTGAACATGG AAAGATACCA AAGAGATAGG CCGCCGTTCC CGTACTTCCC AGAGTGAGTC GCAGCAACCT TTTACAACGT TAGGTGAGAG CTAAGGATAA TCTAGATTCT CCGTCTTCTT CTCCAATGAC AAGTTTGACA CCGCTGGTCC TCAGCCATTA GGGTTCGATG GGTTTTTCAG GGGTGCATTC TCCTATCACT TCCATAATTT CTGGTAATCT TCTCTCTTGC AGTTCAAGAT GGGCTAAGCT GACTGTATGG TTTTTATTAT AGGTGGCTGC CCTTTGACCC CTCGCGCAAC TTTCCAGATC TCGGTCATCG ATTCATCAAA GGCGAAAGAG CTTTGCGTGA TGCCGCGCGT TCTTCATCCT CCGACCAAGC TTCCCACCTT GTCGGTGACG ATGTCGAGCC TCGCAGTGTC CTCGATCCTA GTCAAGAGGG CGTTGAAGGT GACGGTGATG TCACGAGCAG GGAGGACATG GATGATGAGC TTGATTTGAG TTGGTCAACT GTACTCAAGA GGAGCTTTGA AGGATTTTTG AGGGGAGAGA GGCCAAATGC TTATGGGGAA TGGCTGGAAT GGGGGGATTA GGTACAGGAA CTTGAGCAAT TTGGATGAAG GTCGTGCAGG GGGGTGGGGG GGGCATCAGG TTTGGATGAA CGATAGACTG GACGACATAC CTATACCTTG AAACTCTTGA AGATACCCCG AAAAGGCTTT GGAGATTTTT
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Protein sequence | MKIKTISRSL DDHLPSSSSA PHPLSHNLAP HLHPFAKPRE YTRAVTAVKM ERMFAKPFVD ALGGHQDGVY CLGKDSRRAG VVAGGGGDGE VIVHSLGLRR PLLKIPGAHR GMVSGICWTS EAQDRRRGLI TCGKLDGTIK LWRSEAFAPG LRDKDAFQGN EFGLGQGEGS GFLDQAGAIG ESGYDEEEGG GLSLDSAKRD ALGQNLEPTM TFTSKNGLNG IDHHRTDAVF ATASNTVQIW DEQRTAPLST LQFGSSMETV SGVKFNQSET SVLASVGNDR TMCLYDIRTG KAERRIVTQF TSNCLSWCPT LPTLLLLGSE DHNLYTFDIR NLETPNQIYK GHVGGVMGCD WSPTGEGFVS GSYDRTVRLW NREEGKSRDV YHTKRMQRVF DVSYTPTADF VLSASDDGNV RIWKSDASKK LGPVSTKERQ AIEYRQKLVE RYAREKGVRE VKERRHVPQS IHNATKLKRE MIEARNIKED RRRKHSRAGR EKPKAERKSE LAVVVVGCVL TLCRDCGCGA AVGGAWYIEC VHRWCDVCAV YMAWCPDLSG CARRAVLLRV SVSGPISSSH SLVHLVFLPS HPLSSYPLIH IARMSLFGQI KRHNPAKPRR SPLPTSAWDD DRRFGLSGPS AYSRWFTTLY IPLRLPFGHP SDSHSLSSGS SLGSPRPYHA KPRTRHLKVY LPIPPRLYAR IPRLNSPIRV LLLLVFSVVV GFFLLGFRKT RQGERTWSPP FVDPDTMVIT PEEAAMVWEW EILSGHYPSI EHPPDHLPLY PSLKNPVVPA TLLPSPSSPT PLVAYQNRAD KFPSAHLAGN GPERHYLSVW DMRESQPGFP ARPMPGSILD LDLVLEKCDL GTNKYVRDCL EFLRIGGGLD IGKRVRRGNY LTQYKQLYYE ESTPSQSLSM MPRNLKQSTG RSKTPLILPD PYDIPASFDS RDACDPLHPR IFHIFWTGPF TDKPYMAVMS FLFTQNLGLD KPVDAVSDTA SVVRGTCRPQ LWLWINPGPA AAVPNPSAKR EMYEQLATNP WSAPFLHDRF RDVVKFKMWN TTEQLDGVAE LKDHWRKMPI FNSGGNTYGD PMGKTEDEVN EEIEDESGKT ASPKKKGGLF EKVGSSSESD YDRLSVILSD MARFIVTHRF GGIYLDADTI FLRDWEELWN YRGQFAYRWS WHEKYNTAVL KLHKGSALST FLFKTALENG LDFHPMTVSR YLKDAGLEKL LFRVPDALFD PAWLNMERYQ RDRPPFPYFP EFSVFFSNDK FDTAGPQPLG FDGFFRGAFS YHFHNFWWLP FDPSRNFPDL GHRFIKGERA LRDAARSSSS DQASHLVGDD VEPRSVLDPS QEGVEGDGDV TSREDMDDEL DLSWSTVLKR SFEGFLRGER PNAYGEWLEW GD
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