Gene CNA05400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA05400 
Symbol 
ID3253296 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand+ 
Start bp1446692 
End bp1447464 
Gene Length773 bp 
Protein Length95 aa 
Translation table 
GC content50% 
IMG OID638252860 
Productu6 snRNA-associated sm-like protein lsm8, putative 
Protein accessionXP_566856 
Protein GI58258887 
COG category[K] Transcription 
COG ID[COG1958] Small nuclear ribonucleoprotein (snRNP) homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAACACCGCC ACCCTACACA GCTCGGTCAC AGCGACTGAT CCCGTCCGCC CAGGCACCCA 
AGCCGCACTC CATCCGCCAT CCGCGTTTAC TTGGTTGCCC TCTTTCTTTC TTGTGGCATC 
GCCCGACTAT GGCCTCAATC GAAAGTTATG TTGACCGTGA GTGGCTGCAG ACCTTACTTC 
CGTCAAAAAC TGAGCAACGA CTCGCCAAAG ACACTGTCCA AGTCATTTTG CAGGACGGCC 
GCGTTATCGT TGTACGATCA TTTCCCTCCA TTCACTGGGC CATAATAACA TCTGAACATA 
GGGGAAGCTA AAAGGGTATG ATCCGCGCAC GAACCTCATC CTCTCCGACT CGGTGGAACG 
TGAATTTTCT ATGGACCAAG GGGTTGAGAT GATTCCGTTG GGCCTATACG TGATAAAAGG 
AGACAATGTG TAAGTAGTGT ATGTGCAAAT CTCAATTGCG ATGGCTGATA TTGCCTCGTT 
ATAGTGCGGT AGTGGCAGAG TTGGATGAGG AGAAAGATAG CACCATCAAC TACAACGACA 
TCCGGGCAGA ACCTCTAGCC GAATTACGGT ATTGAGTATC AGCTAGTAGA CATTGGCAAC 
TTGGGAGATG AACGCGAGAC AGGTCCGAGT GGGCAAGGTG TACTCTGAAC CGAGACCCTT 
TGACAAAATG AAGCGCTCAA TTGTCATGCG GGCGCACAAG GAAATGACGA CTCAATTCTT 
TTTCTTTTTC TTTTCTTTGC GGCAGGACTG CATGCAAGGA TTAAGTTGAT CGA
 
Protein sequence
MASIESYVDH TVQVILQDGR VIVGKLKGYD PRTNLILSDS VEREFSMDQG VEMIPLGLYV 
IKGDNVAVVA ELDEEKDSTI NYNDIRAEPL AELRY