Gene CNA04200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA04200 
Symbol 
ID3253668 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand- 
Start bp1129244 
End bp1129642 
Gene Length399 bp 
Protein Length114 aa 
Translation table 
GC content50% 
IMG OID638252740 
Productubiquitin-protein ligase, putative 
Protein accessionXP_567169 
Protein GI58259513 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5194] Component of SCF ubiquitin ligase and anaphase-promoting complex 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.267821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTGG AAATAAATTC CTATCGCGCG GTAGCCTACT GGATTTGGGA CGTTTCCGAC 
GAACCTCACA AGCTTTACCA CTACGCGCCG CCGGACGAAG TTGGCCTCGA CGATGACGAC 
GATCAGGACG TCTGCGGTAT ATGCCAAGCG GCCTTCGAGA GCACTTGCCC CGATTGCAAA 
ATACCCGGCG ATGACTGTCC CTTGAGTAAG CGTAGTGTAT GTGTGGAGCA AAAGCATGAT 
GCTGATTTGT TCTGTTTAGT TTGGGGGGAA TGCACCCACG TTTTTCACAT GCACTGCTTG 
TTGAAATGGA TCGGTCAGAA GGAAGATGAA TCACAGCAAC AATGCCCCAT GGACAGAAGA 
CCTTGGGGTA AGTCTTCTAT TAAAAGTCTG TGCTCTTAA
 
Protein sequence
MKVEINSYRA VAYWIWDVSD EPHKLYHYAP PDEVGLDDDD DQDVCGICQA AFESTCPDCK 
IPGDDCPLIW GECTHVFHMH CLLKWIGQKE DESQQQCPMD RRPWGKSSIK SLCS