| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA03900 |
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| Symbol | |
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| ID | 3253408 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006670 |
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| Strand | - |
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| Start bp | 1045041 |
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| End bp | 1050278 |
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| Gene Length | 5238 bp |
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| Protein Length | 1494 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | 638252709 |
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| Product | eukaryotic initiation factor 4F subunit P130, putative |
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| Protein accession | XP_566733 |
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| Protein GI | 58258641 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3064] Membrane protein involved in colicin uptake |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTTCTCTCTT CACGCTCCGG ATACCTCCCC GGACTCCATC TACAAGAGAG TCCCAGCGAT
AATCCACCAG AGGGATTTCA AGAGGTTCCT TCCAGCTTGC TCTCATCCTC ACCACTCGTT
CTCCGTGGTG TCATAGAACA AATTTGAAAA CGGACAAGGG CTACTTTTAC CCTTCAAGCG
GCTTACCACC TATATTCGCA TCCACAGCGT GAATAATTCG ATTATCCTCT CGGTGAGTTA
GAGGTTTGAG CAATCTTTCG CGGTCATTTA ACGCCGGTTG CTGGTCGTTC TCAGCTCACT
CTTCTCCACG CACAAATCAC AATCTATCCG CTCCCTTCTC GTCCCCACTA CCCCTTGTCC
TCCAAAGACG TACTTTCCCA TACATCCCTC GTCAATGAGC CAAAACACAA GTCCTACGGT
CAACGGCGAC AACAAAACGA GCGCCCCTGG CTCCATTGCT TCTGTTTGGG CGCGTGGTCC
TCCATCTGCC GTCTCATCGA CTTCCGCTTC CAAGAATCAA TCCGGCGTTA ATACCCCCTC
CCAAGAGGGA GCGGGCCTCC CAAACATAAC CAGTGTATCT AGCTCAGCTG CCATTTCGAT
AAGAAATGCC CATTCAAGAC AGAATAGCTT ATTAGTGGGG CCTGGCGGCG TTGATATCAA
GAAGGGCAAG TTCCTATTGG CGGGAATATT AGGAAAAAGC TGACCTTTAC TCAATACAGG
TAACATTGCA TTTGGGACAG TGGATTCACC CAATACAGCG TTATCTTCGT CCCCTGCTGC
TCCTTCGACC ACCGGCGGCC ACCTTGCGGA TGCAGTGAAA TCATTTGGCT CGATCGATGC
GGACGGAAAC TCTGATCCTG ATGTGGTGAA GACTCGAAGA ACCAGCTCCC TTAGCAATCC
TATCGGTCCT GTACAGGAGA AAAAGCTCAG TGTCCATTCT CTCTTCACTA GTAAAGCCCC
GGCGCAGGCC CCCTTGGGAT CTTCTCCATC ACGCCCTGCA ATGTCTCCTC CACAACCGCA
TCAGCAGCCT ATTCCTCATA TACGTCGCCA GTCAATGGGG CAAGGGGGCC CCGGATTCCA
GAGCCAGGTG CCAGTAGGCT CTCCAAGTTT CACAAGCGGC CCACCCATGC GTCCTCCCAT
GGTAATGCCT AACCAGCCAC GTTCACCGGT GGCGAATCCT AACGTCCCTC ATGGGCAATA
CGCACCCATG CCTCCGCTTC ATGTGCAACA GGGTTTCCGT CCCCCGCAAC AAGGTATGGG
GACTCAGCAG CCTCCAGTGA GACCTAATGG TATGGGCACT CAGGGCATGG CTCGTCCCAT
GATGGGTCCT GGCCAATATG GTATGCATCC TGGACCCCAA GGGCCCCAGT ATCCAGTGAT
GGGATATCCT CCTCAAGGAG GTTTCTATGT GAGCTATTAT TTTTGGACCG TATGTCGATG
TTTGGGATTG ACATAATGTA GCCCGGTTAT GGGCCGTATG ACCAACAGCC GCATTACGGT
TCCCCACAAT GGGCCCAGCA ACAGCAAAAT CAGTCGTTCA ACGCTAATTT CGGTCCCGGC
CCTATGTCAC CTCGGAGCGG TCCTAGTCAG ATTTCTTCCG CCCCCTCCCA ATCTCCTTTG
CCACCTCAGG GAGTTCCACT TGGCAGCGGT GGGCCTAGTC CCATTCCCAC TCCGCCGAAT
CGACCCCCTA ACTTGATGGC TGGTCACCAG CATTCGGCCT CTATTCCTGC TACTCCAATT
CCTTCTACAC CATCTCGTCC CATGCAAGCT AACGTACCTC CTCCCTTCCT TTCCGGAGCA
GCTTCAGTGT TTACACCCAG AGGTGCTTCA AAGGCCGTTA AGATAGCACG TGAAGATGGC
ACCGCTGTGA ACATGAAGGA AGTTGCTGAA GCGGCGTCAA AAGCGGTTTC CAGTGGTGCT
CACACACCTG AATCTGCGGC TCAACCTTCT AAAGATGATG CGCCTCGAAG AAAGCCTGGT
TTACCTGTGA TTGTCAGACT TGAATCTGAG GAACAGAAAA AGAAGAGGGT AGCAGAAGAA
GAAAGAGAGG CCAAATTGAA GTTTATGGAA GAGAAGGAAG AGCAGGAGAG GAGGGAGCGC
TTGGAAAAGA AGATCAAAGA AGATGAGGAG CGCCAGGCAA AAGAAGCCGC AGAAAAAGTA
CGTGATGTCC CTTCAATAGT TGTATAGACG TCACTGAGAC ACTATGGATT AGGCTGAAGC
AGAGAAGAAA GCTAAAGAGG AAGAAGAAAA GAAAAAGCTT GATGAAGCTT ATGCCGCGGA
AGCGCTGGCT GCAAAGAAGC TCGCAGAGGA GAAGGAAGCC ACTGCCAAGG CCGCCAAAGA
ACAAACAGAA GCGGCTGAAC GAGAAAAGCT TGCGGCACAC GCTGCAACGC AAGAAGCTCG
AGACAAGGCT GAAGAGCAAC GTCGTGAGCT TTTGTCTACC CCTGTCACTC CAGCTGCAGT
ATCACCCGTG GAATCTCCGG CGCTCGGGGC GGGGCTTCCT GCCAAGCCTG TAGCTGCAAT
CAGCGGTGCC ATGAAAACAC TCCCTACAGC CCCGGAGCTG GCTTCTACAT CTGTCGCGAC
CATCAATGAG ACGCCTTCAG CCTCCGCATC TGCTCTTAGT TCTGCCCGGC CTATCAATGA
TCTCAGTTCT ATCACTTACC CCGCTACGCT GAAGAGCCCC GATCCTCGAC TAAATGTCGA
CGCCGAACCC GGCAAATTCC GATACGACCG CGAATTCTTG ATGCAGTTCA TGGCGGTGTG
TCGTGAGAAG CCAGATACTC TTCCTCCTTT GGAGGACATT GGCCTAGAAG TGGACGGTGG
AAGCGGGTTT GGTGGACGTA GCTCTCGTGG AGGAAGTCGA GCTTCAATGG GTCCCTCGAG
TCGCTCTGCT CCCGGCGGCG CTGGCCTGGG CATTAGTGGT TCCAATCGCT CCGCCTTCCC
CGGTCAGGGC ATGGGGCAGT TTGGCTCAAT GGGTCAATTC GGCTCTGGAG CCGGACCCAT
TCGTAGCACA AGTGAGCAAC GGTACCGTGC CAGCCTCAGT AACCGCACAC CTAGTTCATT
GTCTGGTTTG CCGTCACTAG GGATCTCAGG GTCACGAACT GGCGCCAACA GAGGTAGTCA
GCGTGGCTCC AAACGTGCTC CACAATCGTC TCAAGTCCCA ACATCTGCCA CTGCCCCTAT
TCCGATCTCC GAAAATGCTT GGACCCGAAC ACGATTGGGT GGCGATGCTC AAGGTACCCC
TGCTTATATC GAACGAAAGG TAAAAGCGCT CTTGAACAAA TTGACCGAGG AGAAGTTTGA
CCCTATTTCG CTTCAAATCC TCGAATGGGC CAACAAGTCA GCCAACGAGA CGGATGGTTT
GACTTTGAAG CTGGTCATCA AACTCATCTT TGAGAAAGCC ACTGACGAAG CTCACTGGTC
TGCCATGTAC GCGAAGCTTT GTAAGCTGCT GCATGATGAA ATCAGCCCTG AGGTATCCGA
TACCATTGAT GGCAAACCAG TTGCTGGACG TGCTCTCTTC CGTAGATATT TGCTTGGTCG
TTGTCAGGTG GATTTCGAGG CTGGTTGGAA AGCTCGTGAG GACACAGCTG TGGCCGCTGC
GGCGAAGAAG GAGGAGGACG GTGCCAAGCA GGAAGAAGCG AAGGATGACA AGGACAAAGA
GGCAGTTCTC ATGAGCGATG AGTATTACGC TGCTCAGAAG GCGAAACGTC GCGGTTTGGG
TCTTGTGCAG CTTATCGGAG AGCTCTTCAA AAGGGAGATG ATTTCCAATA GAGTAATCAA
AGAATGCTTG CTCAAATTAC TCAGTAACAC TACGGACCCT GACGAGGAAG ACATCGAATC
AGCCTGCAAA CTCCTTACTA CGATCGGTGC GGCGTACGAT CGAGTCGCGC CTGAAAACCT
CAGCAAAGCG TTCGATATGC TCAGTAAAAT GATGCAGGTG GAATCATTGT CCTCACGTAT
CAAATTCATG ATAATGGTAG GAAACTAGAA CTTCTTGACC ATATTGCCTA GCTAATAATG
GTTAACAGGA TGTCTTCGAT TTGCGCAGGA ATGGATGGAA ATCAAAAAAG AATCAGACGA
GCGTTATGAC AATTGCCCAA ATTCACGAAC AAAATGCAAA GGAAAAGAGC GCTGCTTCCA
CAGCAGTCTC CAAAGAATCT ATATCCCGTG GTGGTTCGCG CTCCGGTAGG GACAGACATG
AAGGATCTCA ACCTGGCGAA TGGCAGTCTG TCTCTGCTGG TCCGCGTTCC CTCAACCGAC
CTACTGATTT CTCCAATATG GGTCGTAACA TCAGCTCTGG TGGAACAGCC CCTTCTTTCG
GTCCAACTAG CATCTTCAAT ACTCGAAAGG GTAAGGCAGG AACCCCCACT AATGTCACTC
CTCCTATGTC TCGCCAACCC TCTTCTGCAA ACATGTTTAG CGCTCTCAAT GATACCCAAG
AGAATGAACT CGTGTCTGCC GAAAGACGGA CCAGCACTGA CAACGGTGAA TCTGCTCCAC
AACGCAAGAG GCTCAATCTG GCCCCTCGTA CCAAACCAGT AGAAGGCGAA GGCGAGAACA
AGGACGAAGG GGCAGAGGAA GAACCGCATG GAGACCGCGT GGATGAACAT GACCTATCTG
AAGAAGAAGC TAGGGCCAAG ATTGATTTAG ATATGAAGGA GTTGTGGGGC GAAAAGGACC
AAGGAGGGTC GAGGAACCCT GAAGATATCG CTGATTACTT TAGTGCTTTA CCCGTTTCGC
GCCGTCCTCT GCTGGCAGAA CGTCTTCTCA ACGATATTTT CAGAATATCC AGGCTGAAGG
ATGCTGAAAT AGTGGCGAAG GGGTGGAAAA CCGCTTTACT GCAGCAATCA GTTTCTGCAG
ATGTCCTCAG ACAAAGGTGC GTTCTATATG AAGACAAGTG ATCGCTCTAT TGACATACTG
AGCTAGTCTG GAGCATCGCA TGCCTACTCT AGATGATGAG TCCATTGACT TCCCCTCAGC
TTATGAGGCT ATCGCCCTCC TGGTCCGAAA TGTTTCTCTA TCCCAAGAAG ACATCAACGC
TATGGTTGGG AGGATTGAGG TAGAAGGAAC ACCTCGCATC ACTCCCCCGC AGAAAATGGA
AAAAGCCCTC AGAAAAGTCG ATGAGGCGGG ATCTTTGGCG TAGACAACCG ATTTCTTCAA
TCTCTTGAGT TGATTATCCT TGCTTCTTCA TATATTTTAC CGTTATCCAT TTTTCTCTCT
AATTTCTATC AGGTTTAT
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| Protein sequence | MSQNTSPTVN GDNKTSAPGS IASVWARGPP SAVSSTSASK NQSGVNTPSQ EGAGLPNITS
VSSSAAISIR NAHSRQNSLL VGPGGVDIKK GNIAFGTVDS PNTALSSSPA APSTTGGHLA
DAVKSFGSID ADGNSDPDVV KTRRTSSLSN PIGPVQEKKL SVHSLFTSKA PAQAPLGSSP
SRPAMSPPQP HQQPIPHIRR QSMGQGGPGF QSQVPVGSPS FTSGPPMRPP MVMPNQPRSP
VANPNVPHGQ YAPMPPLHVQ QGFRPPQQGM GTQQPPVRPN GMGTQGMARP MMGPGQYGMH
PGPQGPQYPV MGYPPQGGFY PGYGPYDQQP HYGSPQWAQQ QQNQSFNANF GPGPMSPRSG
PSQISSAPSQ SPLPPQGVPL GSGGPSPIPT PPNRPPNLMA GHQHSASIPA TPIPSTPSRP
MQANVPPPFL SGAASVFTPR GASKAVKIAR EDGTAVNMKE VAEAASKAVS SGAHTPESAA
QPSKDDAPRR KPGLPVIVRL ESEEQKKKRV AEEEREAKLK FMEEKEEQER RERLEKKIKE
DEERQAKEAA EKAEAEKKAK EEEEKKKLDE AYAAEALAAK KLAEEKEATA KAAKEQTEAA
EREKLAAHAA TQEARDKAEE QRRELLSTPV TPAAVSPVES PALGAGLPAK PVAAISGAMK
TLPTAPELAS TSVATINETP SASASALSSA RPINDLSSIT YPATLKSPDP RLNVDAEPGK
FRYDREFLMQ FMAVCREKPD TLPPLEDIGL EVDGGSGFGG RSSRGGSRAS MGPSSRSAPG
GAGLGISGSN RSAFPGQGMG QFGSMGQFGS GAGPIRSTSE QRYRASLSNR TPSSLSGLPS
LGISGSRTGA NRGSQRGSKR APQSSQVPTS ATAPIPISEN AWTRTRLGGD AQGTPAYIER
KVKALLNKLT EEKFDPISLQ ILEWANKSAN ETDGLTLKLV IKLIFEKATD EAHWSAMYAK
LCKLLHDEIS PEVSDTIDGK PVAGRALFRR YLLGRCQVDF EAGWKAREDT AVAAAAKKEE
DGAKQEEAKD DKDKEAVLMS DEYYAAQKAK RRGLGLVQLI GELFKREMIS NRVIKECLLK
LLSNTTDPDE EDIESACKLL TTIGAAYDRV APENLSKAFD MLSKMMQVES LSSRIKFMIM
DVFDLRRNGW KSKKNQTSVM TIAQIHEQNA KEKSAASTAV SKESISRGGS RSGRDRHEGS
QPGEWQSVSA GPRSLNRPTD FSNMGRNISS GGTAPSFGPT SIFNTRKGKA GTPTNVTPPM
SRQPSSANMF SALNDTQENE LVSAERRTST DNGESAPQRK RLNLAPRTKP VEGEGENKDE
GAEEEPHGDR VDEHDLSEEE ARAKIDLDMK ELWGEKDQGG SRNPEDIADY FSALPVSRRP
LLAERLLNDI FRISRLKDAE IVAKGWKTAL LQQSVSADVL RQSLEHRMPT LDDESIDFPS
AYEAIALLVR NVSLSQEDIN AMVGRIEVEG TPRITPPQKM EKALRKVDEA GSLA
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