| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA03250 |
|---|
| Symbol | |
|---|
| ID | 3253382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006670 |
|---|
| Strand | - |
|---|
| Start bp | 851529 |
|---|
| End bp | 853153 |
|---|
| Gene Length | 1625 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | 638252656 |
|---|
| Product | hst3 protein, putative |
|---|
| Protein accession | XP_566762 |
|---|
| Protein GI | 58258699 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CATCTCCTCG CTATTTCTCA TTCCTCACAT CCATTCATCT ATTTGTCCCC ATAAAGCAAG
CAATCCATTG CTCTTCCTCT TGCTCCTGCC TGCCTGCGTG CGTGCCGCAT CATCCCTTCT
TGTTTGCGCG TGTGACATCA ACAACGCGGG CATGCCGCCT TCACTCGCCC TCGACCACCT
CCTGTGCTCA ACTGACCATG CCGATTTCTC GGCGCGACGC CAGCTTTCCG ACGTATCTAT
CGCCGTCGCC AAAGCTAGGA GGATTGTAAC TGTCAGCGGG GCGGGGATCA GCTGTTCAAG
TGGGATTCCG GTGAGTTGGC TCGCCTTGCT GTTGTTGGTG CGGGGCGGGG AAGCCACCGT
TGGAGTGCTG CTTTGCTGAC GATTTCTTTG GTTTGGTTGA ATACAGGATT TCCGTTCTGA
AGGCGGACTG TACTCGCTCG TGAAAGAAAA GTACCCCGAT GCGTTTTTCA CTGGCAAAGA
CCTCTTTTCA GCGGGGACAT TTGCCAATCC TCAGTCGACT TCTATATTCT ATACGTTTAT
CGCCGAACTA TTTCATTGCT GCGCCTCTGC GCAGCCGACG AGAACACATC ATTTCATCCG
TAAATTAGAG CAGAAGGGGA AGCTGCTGCG TAGCTACACC CAAAATATCG ACGGGTTTGA
ACGTCGAATG GGATTGGAAA GCGGGGGCAG GGGAAAAGGA TTGAAGAAGA AGGAGACGAG
GAACGTAGAG CTGCATGGCG ATCTGGGAAG AGTCAGATGC GTGTTGTGTT TTAGCGACTT
TGAAGCGTGC GATGAGTGGG TCGAGATGTT TAGGGAAGGC GAGGCACCAG ATTGTCCTGC
CTGTTGGAAA CGATGTACGT GCAGGATGTT TAACTGCAGA TGGCAAGGGT ATTGATCTTG
TTTATTTGCG CAGGCGAGTC TCGAATCAAC AGATCAGCAA GAGCGACATC CGTCGGCAGG
CTTCGACCGT CGATTGTGCT ATACGACGAA CCACATCCAC TTGGTGATGA TATCGGCCAG
TTAACGGCAT ACGACGTTTC GCGCCGGCCG GATTTGCTCC TGATCATGGG CACTTCCCTC
AAAGTGCACG GGCTGAAGCG ACTGGTCAAG GATTTCGCGA AAGCCGTACA TGGAGGTAAA
AAGCGCGGAC TGGTTGTATT TGTCAATGCT ACACCGCCGA GTAAAGAGTG GGAGGGTATT
ATTGACGTGC ATATCGAGGG CGAGACGGAT AAGTGGGTAG AAAAAGTCGA AGAAGAATGG
AGGAGGGTGA AGCCAGGGGA CTGGGAGGTA CAAACTACGC TGGACAGCGA AGTTGTCTCT
GTTGTCAAGA CTGGCAAACC CAAAGGCAAA ACGAAAGCCG CCACGCCAAA GGGCAAAGGT
AAGCTGTGTT TTGCTAGTTT ATGTTGAAAT AGAGCCGACC AAGCGTAGCA TTGGCCAAGA
GAGATACAAA CAGGCTGTCG CCCCCGCCAC GGCTGAAAGC ATCACTGCGT TCACAAGCAA
TAGCGGCATC TTCTGAAACG TCGTGAACAA CGCGCAGATA TAGTTGTCGG ACACCCTGTC
CGCCGCGTAC TGATTCGGCC GCAGCATCGC TGCAGGCCAG GATAACGAGA CACGTATAAT
CGCAC
|
|---|
| Protein sequence | MPPSLALDHL LCSTDHADFS ARRQLSDVSI AVAKARRIVT VSGAGISCSS GIPDFRSEGG
LYSLVKEKYP DAFFTGKDLF SAGTFANPQS TSIFYTFIAE LFHCCASAQP TRTHHFIRKL
EQKGKLLRSY TQNIDGFERR MGLESGGRGK GLKKKETRNV ELHGDLGRVR CVLCFSDFEA
CDEWVEMFRE GEAPDCPACW KRCESRINRS ARATSVGRLR PSIVLYDEPH PLGDDIGQLT
AYDVSRRPDL LLIMGTSLKV HGLKRLVKDF AKAVHGGKKR GLVVFVNATP PSKEWEGIID
VHIEGETDKW VEKVEEEWRR VKPGDWEVQT TLDSEVVSVV KTGKPKGKTK AATPKGKALA
KRDTNRLSPP PRLKASLRSQ AIAASSETS
|
|---|
| |