Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNA02350 |
Symbol | |
ID | 3253678 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006670 |
Strand | + |
Start bp | 612949 |
End bp | 617216 |
Gene Length | 4268 bp |
Protein Length | 1023 aa |
Translation table | |
GC content | 47% |
IMG OID | 638252567 |
Product | Ras guanyl-nucleotide exchange factor, putative |
Protein accession | XP_566627 |
Protein GI | 58258429 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AGATATCTGA ATCTCAGGCT ATGGTCGTAA CAACGAAACT GTGAGTCAAT TGTTTCTAAC CACAGCAAAA GCTCCTCAGG TATGAGTCCT GGCAACAATG TGGAGCCGCA CGCCCCTTTT ATGTCCCTTC AGTTTTCTAC GACGGCTCAT CCCTGTGAAT GAACTGTAGA CAAGCTCCAT GAATACCCAG ACAAGCATTC TTGTAACATG ACTGATCCAC TTGCCTTACA TCTCAGATAT CAATTATGCA TCGGCCCAAC GCTAAGCAAT TAACCCTTGG CTGTCTCTTA CCGCCAACTC CTTCAGAACT CGTATCACCA GTCACTCCTT CGCCAATGAG TCCTGCATCC TTTCACACAG CTACTGCCGG TACACCAGAC ACTCTTGCAC GAGTAACATC AGAAGAAGAT GATCGTTCCC GCTACGGCGC AAAGGGCCCG GATGTTCCCC CCGTCGCCCT TCCCGGCTAC CAGCATTCGT TGTCTTACCT CGATTCACTC CAAGAACTCA ATCCTGATCC TGCTCAAGCT GCGCTCCTAC AATCAGCCAG ATTGAAGCTC TCTTCAAAAG ACAAGGAAGC CATGCGTAAA ATACGGTTTA CCATGATGGA ACAGAACTTC TCTGACTCCG CATCTTCCAA CTCTGTTTCG CCTTCAAGTC CTAGATTCCC TCAGTATTCA GCGGCAGGGC CATCCAAGGG CCAAGAGCTA AGAACAAGAA GGTCAATTCT GTCGAAATTT GTGGTGACTG AGCCTCGAGG CGATAGCGGG GAGGACGAGG ACGTGGAGAG GCTGGAAACT ATGAAGCGCT GGCAAAGTCA ACCTGCACTG TCGAGAGAAA GGCACTGCAT GACAAACGTA TGGTACGCAC TGCATCGTCT GGGCATTTTT TGTTAATTAG ATGCCTTTCA CATGTCGCAA TAGTTTCTCA GCACACCAGC GTGCAGTGTT GATTATGCCA TTGCAGTAGT GGGTCATGAA GGAGTCGGTA AAACGACGAT AATTGCCGAG GCTTTGAGAG GATGGGGGAT GTCTAATCCC CTAAGTATTT ACTCTCCGGA TGGACATCTC AGTGAGTTCA CTTGGGTCGC AGCAGACAAA ATTCATCGTA GCTTACACTC GCCCAGTATT TTCTTGTTGC TCACAGATTG CGGCTGGGGG CAAATTGAAG ACAGGTTGCA AAGTTGAATT CTTTGAAATG GGCATCAATG CACTGGATCT TACTCCCGGG GCGGCGAGCA TCTGGCCATC CTCTGCCCTA AAAGTGTCCG GCGCCGTTTG CTGTTATGAT GCCAGACGAG AAGAAACGTT GGAAGGACTC AAGAACTGTA TAGGTATGTC GTTGGTATGG GGTGTATGTG TGTACCACGA AACAATCTTT TTTGTCCATC ATTACTGACT GATTATTGTC CTTACATCTC GTTTTGTGAC TATTCAATGA CTGCAGAACA GTTGAGCGCC ACAAGCACAC CCATCGTCAT TATTGCATGC AAGTCTGACC CAGACGCAGA ATTGCGGGTC ATTGCTGCGC ATGGTAATTC GATGGGTGAA CCATGCAATG TAGGACTCAT CGAAGTGACA ATCAAGACTC ATGAAGGAAA ACTCAAGATG AGGAATGCTG TGAGATGGCT GCTGTATAAA CTTGAACAAC GGCAACGTGA GTGTAATTCA TTGAATTTCA GTGGACGATA GACGCTGTGC TCACGGCCTG TGTCTTTGTC ACACAGGTCG TCAACAGAGA CAGCTCTCCG CTCTCAACAT AGCACAGAGC CTTGTCTCTG GTGTTCAGGC TCCTACAGCT GTTGGAAGTA TCGATGTGAC AAAGTCCACC ATTGGAAGCC TAGCTTCTCT CGACTCGGAT GCAGACTGTC TGGGAGATAG ATCGATGTGG GAGCAAACTT TGAGCACGGC CTCAAAGACG TCTGAAGCAC CTCTCATAGG CCAAACTCCT GGAGTTGAAG AAGAGATACG TGAAGATCAA AAATCCACAT CTTACGGTGT CGGGAAATTA GTAACACCAG ACAAGGAGAG GATTATGAAT GACGGAAGCC TGGGGTGTCT AGACAATTTG GAAGAAAGCA CAAGGCGGGA GAAAAAACAG ACTGGACGTG TACAAGCGAA ACATGATACT ATTGCAGACC AGATTGCAGA GGGGTGAGTA CATGTTCGAG CGGTTAGACA CTGTTATAAC TGATTCACTC TGAAAGGATT TCGCCGGTCT ATGTAGCCCT AAAAGACCTA CTGAACCGAC TTTTTACTTC AATCGTGTCT TCACAAGGTA AGTTCAGTTT GCAAGCAGAA AAATCATTAA TCTCCTTTTA GATGACGCGT TTACCAGGTC GTTCTTTCTC ACTTATCGCC GCTTTTGTCA TCCTCAAGAT CTGATGCTTG AGTTTCTTAA GCGCTTTCGT GAAATAGAAG ATTATGCTGT GTCCAGTGAC GTCAAGAATT GGGCGCTACT GAAGTAAGTA ACCACATATT GGAATCTCGT TGCTTGCACT GAATAACCTG TTTCAGACTC ACGGGTGCGC TCGTCGATTG GACCAACCGA TACCCAGGCG ACTGCGTGTC AATGTCGACT CCAATCATCT TTAGCGAAAT CATTATCCTT CTTTCTAAAC ATACCTTCAT GGCCCATCTT ATCTCCGACC TCATTTTAGT CCAAGATGCC CTTCCTAAAA CTACAGATCC AGACGAATCA TGGTCCATGC GTTCACACGA TGTAACATCA CATAATGTAG AGAAGAGTAT ACAAGTTCTG ATTGATAAGG AAGGAGGGTC TAAATTGGAT GATAATGAGG AGGAGGACGA AGTGGGCTCT TTAGGGCATA AGGCGGCTTC CGAACTATCG GCATCGACTG GTAGTTTACA ACTGGAAGAA GTACAGCGCC AAGGCAGCGG ATCTGACTCT CATCGAGTAA GGATCCCATC TGGAGTTTCC GTGCTTGGAG AAGAGGGTTC CCTCTCCTCC GAAGGTCAAC ATTCACATAC CCGCCCAGCT GGATCATCCT ACAGGATGAA CAGCATGCAA GTCAGCGATG AGGTGGCCGA TGCCAGATGG GGGAATGCGT TGAACATGGT CATGCGGATG GAGCCTAGAG TGTTTGCAAC AGAACTGACG AGGATGCAGT GGGAACTGTT CCTTGACATC AGAGTGAGTC TGAGAGCACC ACTAGTTTGA GTTACTAATG AAGCCTCTTT CAGCCAAGGG ATGTTTTCAG GCATACTCTT GGAAAGGAAA CCGGTGGCCC TGTCCGCAAG TCGATCAACT TTTTTAACCA CTTGTCCAGA TGGTGATTAT GTTTTCCCTC ATGACCTGGC AAAATCTGAC ATTTGATTTT GTTTACCTTT TATAGGATTT CGACCATCGT TTTAGCTTCT TCGAAAGCAA AACATCGAGC TCGTGTAATC GAACGATTCA TATTCATTGC CCATCAGCTC CGTCGCCTCA ACAATTATGA CTCTCTCTAT GCCGTTATTT CCGGTTTACG GGAGGCCTCT GTTCATCGTC TGTCAGCGAG TCAAGCACTG ATACAGCTCT CACCAATTGC GGAACAGGAT TACCACTCTC ATCTCAAACT GATGGATCCA AGGAGTGGAT ACACCCAATA CCGCAAAGCA CTACAGGCGG ATATCGACAA TGGGCGAGGC GCCATCCCCT TACTTAACAA TATATTGGGC CTTGTATCAC GATTACAAGG GGTCCGCCCA AACGATTGCA GGGAGGAGGA TGGTAAGATA CAGTGGGATA AGTTTATGAG GTTTGGGGAG ATTCTCTCTA TGATCCAGGA ATGCCAGACT AGAGGGCCGA TGGTAAATGG GCAAGTGGGT CAGGGGTTCA AAAAGGTCAT TGAAGAGACC ATTATTCTGT CGGATGAGGA TGTAAGTCCA TGCTCATATT TTTCTTGTCT TGGCGGAAAT GTGACTCACT TGCCATTCAG GCTCTATGGG AAAGAAGTCA GTCTCTCGAA AACAGCGGGG GTACAATTGG GGGGAAAATG CTTAGACGCT TAGCAAATCT CGGCTTTTAA ATCGGGCGAG GGACACATCG TATCACTACT ATATTTGAAA AATGTTTTCA GACTTCCAAC TCGACCCGGT AATGATGACC TCGATGATTC GATGATTAGC ATCATGGCGT GTGGAATTGA TGGATAAAAT CAACAACACG AAGGTGTGCA TATTATATTA TATTAGAAGG GGATAGCGGT GTTTGCCTGG GCATACACCA AACCGCAAGA CTCAAAAGCA ATTTCATGCA ATAGACAT
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Protein sequence | MHRPNAKQLT LGCLLPPTPS ELVSPVTPSP MSPASFHTAT AGTPDTLARV TSEEDDRSRY GAKGPDVPPV ALPGYQHSLS YLDSLQELNP DPAQAALLQS ARLKLSSKDK EAMRKIRFTM MEQNFSDSAS SNSVSPSSPR FPQYSAAGPS KGQELRTRRS ILSKFVVTEP RGDSGEDEDV ERLETMKRWQ SQPALSRERH CMTNFLSTPA CSVDYAIAVV GHEGVGKTTI IAEALRGWGM SNPLSIYSPD GHLIFSCCSQ IAAGGKLKTG CKVEFFEMGI NALDLTPGAA SIWPSSALKV SGAVCCYDAR REETLEGLKN CIEQLSATST PIVIIACKSD PDAELRVIAA HGNSMGEPCN VGLIEVTIKT HEGKLKMRNA VRWLLYKLEQ RQRRQQRQLS ALNIAQSLVS GVQAPTAVGS IDVTKSTIGS LASLDSDADC LGDRSMWEQT LSTASKTSEA PLIGQTPGVE EEIREDQKST SYGVGKLVTP DKERIMNDGS LGCLDNLEES TRREKKQTGR VQAKHDTIAD QIAEGSFFLT YRRFCHPQDL MLEFLKRFRE IEDYAVSSDV KNWALLKLTG ALVDWTNRYP GDCVSMSTPI IFSEIIILLS KHTFMAHLIS DLILVQDALP KTTDPDESWS MRSHDVTSHN VEKSIQVLID KEGGSKLDDN EEEDEVGSLG HKAASELSAS TGSLQLEEVQ RQGSGSDSHR VRIPSGVSVL GEEGSLSSEG QHSHTRPAGS SYRMNSMQVS DEVADARWGN ALNMVMRMEP RVFATELTRM QWELFLDIRP RDVFRHTLGK ETGGPVRKSI NFFNHLSRWI STIVLASSKA KHRARVIERF IFIAHQLRRL NNYDSLYAVI SGLREASVHR LSASQALIQL SPIAEQDYHS HLKLMDPRSG YTQYRKALQA DIDNGRGAIP LLNNILGLVS RLQGVRPNDC REEDGKIQWD KFMRFGEILS MIQECQTRGP MVNGQVGQGF KKVIEETIIL SDEDALWERS QSLENSGGTI GGKMLRRLAN LGF
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