Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNA01550 |
Symbol | |
ID | 3253467 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006670 |
Strand | + |
Start bp | 418415 |
End bp | 420712 |
Gene Length | 2298 bp |
Protein Length | 685 aa |
Translation table | |
GC content | 53% |
IMG OID | 638252489 |
Product | hypothetical protein |
Protein accession | XP_566500 |
Protein GI | 58258175 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CATCACGCGG GACAGCTGTC ATTGTAACGG ACACGGATCC ATACACCACA CGCACAGCCC CCATGTCGCC CCAACAGCCC GCCAACCCCT CAGCCGCCTC CCACAATGCC CAACTTCTCC AGTCACACGA TCTCGTAGCC TCCCTCCCCA CACCCTACTT GCGTCTCCTC GTCCTCTTTG CCAGGCCCAT AGCCCTCTTT AAGCATGTTC TTCAGGTATT TCTCTGGTCA CCGGGGAGGA GGGTCGAGAG CTGGATGGTG GTCGGAGCCT GGTGGGCGCT CTGCCTTGGC TCTCAGCCAG CTTTTAGGTA TGTCATGAAC TTTTATGGGT GAACGGCCAT TGCTGACAGG CTGCTGCTCC ATAAGATTCC TCCTACCCCC TTTGGTATTT CTACCACTGC TACCGCTTGC CACCCTTCGT CTCAAACACA CTCAAAAGAC GCCAACGGAG AATTCACCAT CCTCTCCCGC GACACATGAC ACACTCCTAC TCACACTTTC CGACTTGAAC GAGATCTACG CGCTTCTGCC TATATCGCCT CTTCCAGCCA TGTCAGACGT CTATGCGCGT TTCCGACAGC TGGGCCCCGT GCGTCTCATT AGAGGCCTTG CAGTTCTTTG GGGCACATGG CTTGTTCTAG GCCAACTCGT AGTTGGGTAT AAGACTTTGC TCGCTCTCAT CGGCACCGTC ATCCTACTAC TGCCGTCCCC GCCCCTGGCG CATTTCATCA ACCTTCTGTC TGGGTCTTTA TTCTTCCGAC AAGCTGTCGC GTTAGCCTTC CTCTTTACTT TTGGCTCGCC TCCGGAAACC TCTTATCGTT TCAAGCTGAA CTTTTCTCTT TGGGGTTGGT TCAAATCAAA GTGGACGGCC TCCCGTCGAC CCTCCCTCGC CTTCGCATTC CGTCCCAAAA TGTCTGGCAA AGTACCTTCT GGATCTGCCC TTGAAGTGGA AAGAGAAAAA TCTGAAGGAA AGGAAGAGTC CCATATCAAA GTGGAATCCC CTATCTACTT TCGTTTCGAG ATCCATGAGA ATCAGCGATG GTGGATGGGA CTCGACTGGA CATCTGCTCT CCTTCCTCAG GAAAGGCCTA GCTGGTGTGA CTCCCATTTG CTTCCTGTTT CTCCTCCCCA AGCATTCACT TTACCGGCGC CTGTCTCCGT TGTTATCAAC ACCGCTACAA TGAAGGACAG ATATGCCAGG GTGATGAGGT CGGCAGAGTG GAAATGGCTG GACGACGACT GGTCTATCGT TCGAAGTGGA CCTGGCGCCA GTGCTGCGCC CGGCACTCAA ACCAACCCAG TCTTGCCACC TGAGAATGAT CCGGATTCCG GTCATTCTCT ACATCAGGGC CAGCACCATA ATCAGCCTCA ATCCCCTCAA GCACGTACTG CTAGTCGACC TTCCTCTTTT ATCAGTGCCT TTGGTTCACC GACCGCCTAT AGCCCTTCTA GTACGGAGGA TTCTACTTCC TCGGCGGGAT CGCGTGCACA ATCAATAGCT GAGCAGGCAT TTACCAAAGG CCTTGAAAGG TTAAAGGCGA GGGCGGTCAG CGGGACTGCA CCTCCAGCAA CGGCAAGCTC TCCGAGAAGA AGCGGTGAAT CGGTGAGAGG TAGGACAGGG AGTTATGATG CTACGGATGA AGAGGGTTCA GAGGGGACAC CGAGTACACA AATAGGGCAA CAACCTGGAT CCGCACCTCT TCCATCGGAG ACTATTCCTG AGAGAGATGC AGCAACTGAT GCAGATGGCT GGGTATACGG GGACAATAAA TGGGAGAATG TCGGTTCAAA AGGCGGTTTA GGCAAGGTGA GTATCGCTTC AGCCCACCAA AGGTAGTTCA TTGATTATAT TTATGATAGT TTACGAGGCG AAGAAGATGG CGACGAAGAG CCATTTGCAT CGAGACTGTC CGCAAGCTCA GCCCCAGTGA CGACCCCGCA ATCACCATCT CACCGTCAGC CACAGAGTCT GGAGCAAACA CTCCCACTCC CGCCACGTTC GCCGCAGCGC CCTCTTCTCC GTTGAAATCA AAGCCTGCAA TAGGATTGTC CGAGGCACAG ACAAAAGGAA CGACTGCATC AGAGGAAGTT TTAGAGTCCG TGAAAGAGTC AACCATCCCT GAGCATAAAA TTGGACCCTA CGGCGCTAGT TCATCGGGTA GCGCACCTGT ATCAAGAGAT GAGATGCTGA GGATGAGGTT GAAAAAGGCA ATGGGGTCTG TGGGTGCTTG AACGGCAGCT GAAGGTGGTA AATGGGACTC TTTTTACACT ACGCCTGTAC AATTTGGCAT TTTGTTTA
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Protein sequence | MSPQQPANPS AASHNAQLLQ SHDLVASLPT PYLRLLVLFA RPIALFKHVL QVFLWSPGRR VESWMVVGAW WALCLGSQPA FRFLLPPLVF LPLLPLATLR LKHTQKTPTE NSPSSPATHD TLLLTLSDLN EIYALLPISP LPAMSDVYAR FRQLGPVRLI RGLAVLWGTW LVLGQLVVGY KTLLALIGTV ILLLPSPPLA HFINLLSGSL FFRQAVALAF LFTFGSPPET SYRFKLNFSL WGWFKSKWTA SRRPSLAFAF RPKMSGKVPS GSALEVEREK SEGKEESHIK VESPIYFRFE IHENQRWWMG LDWTSALLPQ ERPSWCDSHL LPVSPPQAFT LPAPVSVVIN TATMKDRYAR VMRSAEWKWL DDDWSIVRSG PGASAAPGTQ TNPVLPPEND PDSGHSLHQG QHHNQPQSPQ ARTASRPSSF ISAFGSPTAY SPSSTEDSTS SAGSRAQSIA EQAFTKGLER LKARAVSGTA PPATASSPRR SGESVRGRTG SYDATDEEGS EGTPSTQIGQ QPGSAPLPSE TIPERDAATD ADGWVYGDNK WENVGSKGGL GKFTRRRRWR RRAICIETVR KLSPSDDPAI TISPSATESG ANTPTPATFA AAPSSPLKSK PAIGLSEAQT KGTTASEEVL ESVKESTIPE HKIGPYGASS SGSAPVSRDE MLRMRLKKAM GSVGA
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