| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA00510 |
|---|
| Symbol | |
|---|
| ID | 3253504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006670 |
|---|
| Strand | + |
|---|
| Start bp | 143821 |
|---|
| End bp | 145711 |
|---|
| Gene Length | 1891 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | 638252384 |
|---|
| Product | citrate synthase, putative |
|---|
| Protein accession | XP_566478 |
|---|
| Protein GI | 58258131 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0372] Citrate synthase |
|---|
| TIGRFAM ID | [TIGR01793] citrate (Si)-synthase, eukaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.793982 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTGCTTCTCT TCTCTCCATC TACCATCCAT AACAAACAAA AATGAGCTTC ATTGCCAGCC
GAAACGCCCT CAGGTCCCAG GTGAGCTCCG TCTCCTTTTC TCTATTGATC ATGCAACGAC
TAACAGCCAT CAGTTGCGTC CCTCCCTCGC GAGGTCCTTC GCTACCACCC CTGCCGCCTA
CGCCCAGTCC CTCAAGGACC GCATGGCCGA GCTCATCCCC CAAGAGATTG AGAACGTCAA
GGCTACCCGT GCCGCCCACG GCGCCAAGTC TCTCGGCGAT GTCACCGTCG ACATGGCTTA
CGGTGGTATG CGAGGCATCA AGGGCCTTAT CTGGGAGGGT TCCGTTCTCG ACCCCAACGA
GGGTATTCGA TTCCGTGGCT TGACCATCCC CGAGTGTCAG CAGAAGCTCC CCACCGCTCC
CGGTGGTTCC GAGCCCTTGC CTGAAGCTCT CTTCTGGTTG CTTTTGACTG GTGAGGTCCC
TACCGACGAG CAGGTCAAGG GTCTCTCTCA GGAGTGGGCC GCCAGGGCTG CCATCCCCAA
GTTTGTTGAG GAGTTGATCG ACCGATGCCC CAACACTCTC CACCCCATGA CTCAGTTCGC
CATTGCCGTT AACGCTGTGA GTGCTTTTTT TAACGGGAAA ACCCGATCTA AAGCTGACGC
AACGTGCAAC AGCTTAACCA CGACTCTGCC TTCGCCAAGG CCTACTCTAA CGGTGTCCAC
AAGAAGGAGT ACTGGAAGAC TACCTTCGAT GACTCCATGG ACCTCATTGC CAAACTCCCC
AACATTGCTG GCCGAATCTT CCGAAACGTC TTCGGTGACG GCAAGCTCCC CCCCATTGAC
CCCAGCAAGG ACTACTCTGC CAACTTGGCT ACCTTGCTCG GTTTCGGTGA CAACGCCGAC
TTTGTCGAGC TCATGAGGTT GTACATCACC ATCCACTCTG ACCACGAAGG TGGTAACGTT
TCCGCCCACA CCGGTCACTT GGTCGGTTCC GCGCTCTCTG ACCCCTTCCT TGCCTTCGGT
GCTTCCTTGA ACGGTCTCGC CGGTCCCCTC CACGGTCTCG CTAACCAGGA AGTCCTCCGA
TGGGTCCAGA AGATGCGATC CCAGATTGGT GAGGACGCCT CTGACGAGAA GGTTGCCGAG
TACGTCTGGT CTACCCTCAA GTCTGGCCAG GTCGTTCCCG GTTACGGTCA CGCCGTCCTT
AGGAAGACTG TAAGTAGAGA GCCTGCTTGT TGCTTTGAAA CTTTGCTAAC CTCTTTGACT
AGGACCCCCG ATACACTGCT CAGCGAGAGT TTGCCCTCAA GCACTTGCCC GAGGACCCTC
TCTTCAAGCT CGTCGGTCAG ATCTACAAGA TCGTTCCTAA CATTCTCCTC GAGGCCGGTA
AGGCCAAGAG TAAGTCGCTT TTGACCAGTT CCGACCCATG ATATGCTGAC AGCTTGCAGA
CCCCTGGCCC AACGTCGACG CCCACTCTGG TGTCCTCCTT ACTTACTACG GTCTCCACCA
GCAGGACTTC TACACCGTCC TCTTCGGTGT TTCCCGTGCT TTCGGTGTTG TTTCTCAGCT
CATCTGGGAC CGAGCTCTTG GTGTAAGTCT CCTATACCCG CCTTTAGTTA TCACTCGCAT
TTTTCTGACT CTTTACCCTT TCCTTTTTAG ATGCCCCTCG AGAGGCCCAA GTCTTACTCC
ACCGAGGCTA TCAAGAAGAT GTTCGAGGGC AAGTAAGCGC TTGGCATCAG CTGAGTTTGT
TTGGGTGTGT GGCAGCAAAA AGCCTCGGCG CGTACGCAAG AAGGAATGAA GATGTAAGAA
GCTTTAACAC GGTCGACTGG GTTGGCTCGT ATATTGTCCT TGGTCTCTGT GGATTCATAT
ATTTTTGGAA TGGATGGTCT AGATCGTTTC A
|
|---|
| Protein sequence | MSFIASRNAL RSQLRPSLAR SFATTPAAYA QSLKDRMAEL IPQEIENVKA TRAAHGAKSL
GDVTVDMAYG GMRGIKGLIW EGSVLDPNEG IRFRGLTIPE CQQKLPTAPG GSEPLPEALF
WLLLTGEVPT DEQVKGLSQE WAARAAIPKF VEELIDRCPN TLHPMTQFAI AVNALNHDSA
FAKAYSNGVH KKEYWKTTFD DSMDLIAKLP NIAGRIFRNV FGDGKLPPID PSKDYSANLA
TLLGFGDNAD FVELMRLYIT IHSDHEGGNV SAHTGHLVGS ALSDPFLAFG ASLNGLAGPL
HGLANQEVLR WVQKMRSQIG EDASDEKVAE YVWSTLKSGQ VVPGYGHAVL RKTDPRYTAQ
REFALKHLPE DPLFKLVGQI YKIVPNILLE AGKAKNPWPN VDAHSGVLLT YYGLHQQDFY
TVLFGVSRAF GVVSQLIWDR ALGMPLERPK SYSTEAIKKM FEGK
|
|---|
| |