Gene CNA00370 details

Gene Information

• Locus tag: CNA00370
• ID: 3254017
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006670
• Strand: -
• Start bp: 116872
• End bp: 118899
• Gene Length: 2028 bp
• Protein Length: 547 aa
• GC content: 49%
• IMG OID: 638252372
• Product: hexose transport-related protein, putative
• Protein accession: XP_566468
• Protein GI: 58258111
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0738] Fucose permease
• TIGRFAM ID: [TIGR00879] MFS transporter, sugar porter (SP) family

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGGACA AGACCGCTCC TGCCGTTCAT AGCCTCGAGC CGGTAGGCTC TCACTCATCA 
TTCGACAAGA AGGAGGTTCA TGTCGAGCTC GAAACCACTC AGAAACAGGG AGAGGCAACG 
TTCTATGAGA CCATCTCTGC TTCTCCTCTT AATCCGTGGT CGAAAACTAG TTTCCAGCTC 
TATGGGATCT TACTTGTGGC TGCATTGAAT GCCACTGCTT CTGGCTTTGA TGGGGTAAGT 
TAACGTGGAG GAATCTCATG CAGAGGAAGG GGCTGATACC AATGGGTGAT GGTACAGTCT 
ATCTTCAGTT CTATCAATGC CATGTCACAG TACTCTGAGT ACTTCCATCA CGAAGAACTG 
GGCAGCTCCA CTGGAATGTA AGTGTCTCCA CCTGAGCCTT GCTCAAATCG TTTTTTGCTC 
ATCAGTCCTA TTACTCTAGC ATATTCATGA TCTATACTAT CGGTAATATG ATCGGTTCCC 
TTTTCACAGG ACCTATCTGT GACCACTTTG GCAGACGGGC AGGTATGGGT TCAGGCGCTA 
TCATCATTAT GGCGGCCGCC ATCATCCTCA CTGCTGCAAA GAATGATTCT TATTTGCTCG 
GTGGTCGATT CTTGCTGGGA TTTGGTATCT CTATCGGTAC TAGCTCAGCA CCTACTTATG 
CCCTTGAGCT TGCTCCCCCT CAATGGAGGG CTCGAATCGT TGGCTTCTAT AACACTTGTA 
AAGCACCCGC CTTTCTTCTA GGGATTAAAG AACGACGAGC TGATAATCTA TGCAGTCTTC 
TACGCTGGTT CCATTCTCTC CACTGGTGTG GCTTACGCTT CCAACAAATC TAGCGGCGAG 
CTAGCTTTCC GTCTTCCCCT TGGCCTTCAG CTAATCCCTC CAACATGTAT CCTTGCGGGT 
CTCGCTTTCG TCCCCGAGTC ACCACGTTGG CTCACTGCTA GAGGCAAAAC AGACCAGGCG 
GCGGAGATCT TAGCGAAATA TCATGGAGGC GGTGATATCA ATCATCCTGT AGTCCAGATG 
GAATTGAGAG AGTTTGAAGA GGGTATTCAA GTAAAAAAAG CACAATCTTG GTGGAACTAT 
TATGATCTGT GAGTATGGGC AACTTTGTAG AATAATACGG GCACTGATCA GCTTGTAGTG 
TCGATACTCA TAACCAGCGA TGGAGGTTTC TTATGATGGC GTGCATGTCC TTCTTCGCAC 
AGCTCTCCGG TGTAAGTCTG GGCCTAATCT ACACGTCCCA ACAGCTATTA ACCACTACGA 
TTCAGAACTC TGTCCTTACG TACTACCTCC CCTCAATGTA CACCAAACTC GGCATCACAT 
CCACCGACCG TCGTCTCCTC CTGACGTTCG CCAACTCGAT TGTTTCTTGT ACCGGCGCCG 
TTTTTGGCTC GGCCACCAAC GACATGATTG GCCGCCGTAC TAAGCTTTGG GTGGGATCCA 
TCGTACTTGC CTGCTTGTTT GCTGCTGTGA CAGGCTTTTC GAGCCAGTTC GAGGGCGGAG 
CCGATAATGT GGATGCGCCC ATGAGCAATG CTGGTGTGGC GTTTATCTTC TTGTTTGGAT 
GTGCCTATAG CTTTGTGTAC ACTCCCCTGA CAGCCACATA CTGTGCAGAG GTGTTGGCTA 
ACCATACCAG AGCAAAGGGA ATGGGAGTGG TGAGTCCAAT ACGAAAAAGC TGTTCGACCA 
TCAGTGCTAA TGAATTTACT GCGACAGCAT GTGATCATGA GCAATTGTGC CAATCTGTAC 
AACACTTATG TTACAGCTAT CGCTCTTGAA GCAATTGGAT GGAAGTATTA CCTGGTCTTT 
GTGGCGCTTA ACTTAGTATA TGGTAAGTTC TAATTACCGC CGTTCCCTGC CATGCGTTTG 
AAAAGCTGAC ATGCCTTTGA AGCGGCCGTT TGGTTCATCT TGGGTGTCGA AACTCGTGGT 
CGAACACTCG AGGAACTCAA TTCGGTCTTT GATGCCAAGT GGCCTCCAAA AGAGGCGCTG 
AAAAAGGCCA CTCTGGTGAA GGCGGAGGGT CGTCTAGAAC AGCTTTGA 

 

Protein sequence

MEDKTAPAVH SLEPVGSHSS FDKKEVHVEL ETTQKQGEAT FYETISASPL NPWSKTSFQL 
YGILLVAALN ATASGFDGYS EYFHHEELGS STGIIFMIYT IGNMIGSLFT GPICDHFGRR 
AGMGSGAIII MAAAIILTAA KNDSYLLGGR FLLGFGISIG TSSAPTYALE LAPPQWRARI 
VGFYNTFFYA GSILSTGVAY ASNKSSGELA FRLPLGLQLI PPTCILAGLA FVPESPRWLT 
ARGKTDQAAE ILAKYHGGGD INHPVVQMEL REFEEGIQVK KAQSWWNYYD LVDTHNQRWR 
FLMMACMSFF AQLSGVSLGL IYTSQQLLTT TIQNSVLTYY LPSMYTKLGI TSTDRRLLLT 
FANSIVSCTG AVFGSATNDM IGRRTKLWVG SIVLACLFAA VTGFSSQFEG GADNVDAPMS 
NAGVAFIFLF GCAYSFVYTP LTATYCAEVL ANHTRAKGMG VHVIMSNCAN LYNTYVTAIA 
LEAIGWKYYL VFVALNLVYA AVWFILGVET RGRTLEELNS VFDAKWPPKE ALKKATLVKA 
EGRLEQL