| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_1293 |
|---|
| Symbol | lolD |
|---|
| ID | 4682850 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008787 |
|---|
| Strand | - |
|---|
| Start bp | 1211422 |
|---|
| End bp | 1212087 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 639854020 |
|---|
| Product | lipoprotein releasing system ATP-binding protein LolD |
|---|
| Protein accession | YP_001000953 |
|---|
| Protein GI | 121612464 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.460365 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAATT TAATCCAAGC AAATAAACTT ACTTTAGGTT ATGATGAATT AGTTATTAAA
GAAGCGAGTT TTGCTTTTAA GGATGATGAT TTTGTTTTTA TTACGGGTAA AAGTGGGAGT
GGTAAGAGTA CGCTTTTAAA GTCTTTTTAT GGAGATTTAG AACCTATTTC TGGTAAGCTT
GAAGTATGTG GATCTTTGAT GAATAAAATT GGAAATTTAG AACTTTTAAA ATTGCGTCAA
AGAATAGGGA TTATTTTTCA AGATTATAAA CTTGTACAAG AATATAGTGT TGAAAAAAAT
GTTATGTTGC CTTTAATGAT TAAAGGTTAT AGCAAAAAAG TATGCCATGA TCAAGCTGCT
AAGCTTTTAA AGCATGTAAA TTTAACTTTT AAAGCAGATA AATTGCCTAA TCAACTTAGC
GGTGGTGAGC AACAACGCGT CGCTATGGCT AGGGCTTTAG CTCATAATCC AAAGCTTTTG
CTTTGCGATG AGCCAACGGG AAATTTGGAC GAGTATTCTT CTGATATTAT ATGGACTCTT
TTAAAGTCTG CTAGAGAGCT TTTAGGAACT TGTGTTATAG TGGTAACACA TAGAATTCCT
AGTAATTTAA GAGTGGATTA TCGTCGTTTT AATATAGAAA ATGGAAAAAT GAATGAAATT
TTTTAA
|
|---|
| Protein sequence | MPNLIQANKL TLGYDELVIK EASFAFKDDD FVFITGKSGS GKSTLLKSFY GDLEPISGKL
EVCGSLMNKI GNLELLKLRQ RIGIIFQDYK LVQEYSVEKN VMLPLMIKGY SKKVCHDQAA
KLLKHVNLTF KADKLPNQLS GGEQQRVAMA RALAHNPKLL LCDEPTGNLD EYSSDIIWTL
LKSARELLGT CVIVVTHRIP SNLRVDYRRF NIENGKMNEI F
|
|---|
| |