Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJJ81176_1126 |
Symbol | clpA |
ID | 4683696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
Kingdom | Bacteria |
Replicon accession | NC_008787 |
Strand | + |
Start bp | 1043032 |
End bp | 1045161 |
Gene Length | 2130 bp |
Protein Length | 709 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 639853852 |
Product | ATP-dependent Clp protease, ATP-binding subunit ClpA |
Protein accession | YP_001000786 |
Protein GI | 121613654 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATACC AAGAAAATTT ACAAAAATAT CTTGATAATG CCAAAAATCT AAGCTTAATA AACCACCATG AATTTGTTAC CTGTGAGCAT GTACTGTTTG CATTGCTAAA ACTAAGCACT GATTTTAAGG ATATATTTGA AGAATTTTCA GATGGAGATC TTGAGCTTCT AGAAACCGAA TTAAAAAATT ACATTTCTCA AAACAATCAA GTTATTAAAC AAGAAATAGA ACCTACAATA TCTGTTGTTT TAGATGAAAT CTTACTTTCA TCTAAAAATA AAAATAATGA AATTAAAATT ATAGATTTTT TAGAAAAGCT CATACAGGAT TCAAGAAGTT ATTCTAGCTA TCTCTTAAAA AAACACAACA TAAATCTTAA CAAAATTCAA GAACTTCAAA ATCATGAAAA TATACAAAAT TTAAGCAACC ACACAAGTGA TTTAACACTT TTAGCTCAAA ATGGCAAGAT TGATCCTTTA ATAGGAAGAA AATTTGAACT TGAAAGAATG ATGCAAATTC TTTCACGTCG CAAGAAAAAT AATCCTATTT TAATAGGAGA AGCAGGAGTT GGCAAAACGG CCATTGTAGA AGGATTAGCA TTGGCTATTG CGAAAAAAAA GGTGCCTAAA AACTTACAAA ATGCAAAAAT TTTTAGTCTT GATATGGCTA GTATACTTGC GGGAACAAAA TATCGTGGAG ATTTTGAGAA AAGAATTAAA GAAATTTTAA ATGAACTTGA GAAAATACCC AATGCTATTT TATTTATTGA TGAAATTCAC ACTATAGTAG GAGCTGGAAG CACAGGAGAA TCTCATACTG ATTTTTCCAA TCTTTTAAAA CCAGCTCTAA GCAATGGAAC TTTAAAATGC ATAGGTGCAA CAACTTTTAT GGAATATAAA AATACTTTTG ATAAAAATAA ACCCCTAAGT CGCCGTTTTG CTAAAATAAA TGTAGATGAA CCAAGCCAAG AAGAAAGCTT GCAAATTCTT AAAGGATTAA AAAACAAATA TGAAGAATTT CATCATATAA AATTAAACGA TGAAATTCTT CAATATGCTG TAATTTGGGG TAAAAAATTT TTTAATGATA AATTTTTACC TGATTGTGCT ATAGATCTGA TCGATGAACT TGGCGCTTCT TTTGCTTTAA ATCCAAAAGC TAAAAAAAAT GTCAATTTAA AAGATTTAGA AAATGTTTTA GCAAAAATGA CCCACCATCA CAAAATGTTT GAATTTGATC AAAATAAAGC TTTAATGAAT TTAAAAACAA ATTTAAAAGC AAAAATTTTT GGCCAAGATG AAGTTATAGA TAGTCTTGTT TCATCACTTA AGCAAAGTTT CGCGGGATTT AAAAATTCCA ATACACCACG CGGAGTGTTT TTGTTTACCG GATCAAGTGG AGTTGGAAAA ACAGAACTTT GCAAATCTTT AGCTGAATTT TTAGGTTTAA ATTTAGAACG CTTTGATATG AGTGAATATG CAGAAAAACA TGCTATAAGT AAACTAATAG GATCTCCAGC TGGATATATA GGTTTTGAAG AGGGTGGACT TTTAAGCAAT GCTATTCGCA AAAATCCTTT CAGTCTTGTT CTTTTTGACG AAATAGAAAA GGCTCATCCT GATTTAAGCA ATACCTTTTT ACAGATTTTT GACAATGCTG AACTCACCGA CAATAGCGGT CTTAAAGTAG ATTTTAAAAA TACAATCATT ATTATGACAT CTAATCTAGG ACTTAAAGAA AGCAATGAGC TTGGTTTTTT AAGTAAAAAT GAAGAAAAAA GTAATCGTGC TATCAAAGAT TTTTTTGCTC CAGAATTTAT TAATCGCATT GATAAAATTT TACATTTTAA TGATTTAAAC GATACTATAC TTGTTAAAAT TATCGAAAAA GAACTTGATG AAATTTCTAA AAATTTAAAT AATATAAAAT TATCAGTGGA TGATAAAGCT AAAATTTATT TAGCTAAAAA AGCCTATAAT AAAGAATTTG GAGTAAGGCT TTTAAAACGC ATAATTTCTG AGGAGATAGG AGAAAAAATC AGTGATGAAA TTTTATTCGG AAAGCTTAAA AAAGGCGGTA TAGCTAAAAT CAAACTTGGT AAAAATGGAA AGCTCGAATT TATATTCTAA
|
Protein sequence | MKYQENLQKY LDNAKNLSLI NHHEFVTCEH VLFALLKLST DFKDIFEEFS DGDLELLETE LKNYISQNNQ VIKQEIEPTI SVVLDEILLS SKNKNNEIKI IDFLEKLIQD SRSYSSYLLK KHNINLNKIQ ELQNHENIQN LSNHTSDLTL LAQNGKIDPL IGRKFELERM MQILSRRKKN NPILIGEAGV GKTAIVEGLA LAIAKKKVPK NLQNAKIFSL DMASILAGTK YRGDFEKRIK EILNELEKIP NAILFIDEIH TIVGAGSTGE SHTDFSNLLK PALSNGTLKC IGATTFMEYK NTFDKNKPLS RRFAKINVDE PSQEESLQIL KGLKNKYEEF HHIKLNDEIL QYAVIWGKKF FNDKFLPDCA IDLIDELGAS FALNPKAKKN VNLKDLENVL AKMTHHHKMF EFDQNKALMN LKTNLKAKIF GQDEVIDSLV SSLKQSFAGF KNSNTPRGVF LFTGSSGVGK TELCKSLAEF LGLNLERFDM SEYAEKHAIS KLIGSPAGYI GFEEGGLLSN AIRKNPFSLV LFDEIEKAHP DLSNTFLQIF DNAELTDNSG LKVDFKNTII IMTSNLGLKE SNELGFLSKN EEKSNRAIKD FFAPEFINRI DKILHFNDLN DTILVKIIEK ELDEISKNLN NIKLSVDDKA KIYLAKKAYN KEFGVRLLKR IISEEIGEKI SDEILFGKLK KGGIAKIKLG KNGKLEFIF
|
| |