| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJE1694 |
|---|
| Symbol | cas2 |
|---|
| ID | 3232322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni RM1221 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003912 |
|---|
| Strand | - |
|---|
| Start bp | 1594481 |
|---|
| End bp | 1594912 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 26% |
|---|
| IMG OID | 637293046 |
|---|
| Product | CRISPR-associated Cas2 family protein |
|---|
| Protein accession | YP_179675 |
|---|
| Protein GI | 57238544 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3512] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01573] CRISPR-associated endoribonuclease Cas2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAAG ATAAATTTAT GCGCGTGCTT TTGATGTTTG ATGTACCTAC TAAAAGTAAA
AAAGAGCAAA AACTAGCAAG TAAATTTAGA AACAATCTTA TAAAATTAGG TTATTTTATG
CTGCAATTTA GCGTTTATAT GCGTATTTGC AAGGGTTTAA GTTCTGCAAA AAGTTCTATT
GAAAATGTAA AAAAGATTTT GCCACCTTAT GGAAATGTAA GGGCTTTAAT CATCACTGAA
AAGCAATTTG ATAAAATGGA GCTTTTGCTT GGTGGCATAG TTTTTAATGA AAAAGTTAAT
AACGAAACCA ATTTAACACT TTTTGATATA GATAGTCATG GAGAATTTAA ATACAAAAAT
TCAAATAATG AAGAAATACA ACTAAACAAA AAACAAGAAA AATATCATCA GCAAAATTTA
TTTGAATTTT AA
|
|---|
| Protein sequence | MIEDKFMRVL LMFDVPTKSK KEQKLASKFR NNLIKLGYFM LQFSVYMRIC KGLSSAKSSI
ENVKKILPPY GNVRALIITE KQFDKMELLL GGIVFNEKVN NETNLTLFDI DSHGEFKYKN
SNNEEIQLNK KQEKYHQQNL FEF
|
|---|
| |