Gene CJE1631 details

Gene Information

• Locus tag: CJE1631
• Symbol: truD
• ID: 3232259
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter jejuni RM1221
• Kingdom: Bacteria
• Replicon accession: NC_003912
• Strand: -
• Start bp: 1532855
• End bp: 1533973
• Gene Length: 1119 bp
• Protein Length: 372 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 637292982
• Product: tRNA pseudouridine synthase D
• Protein accession: YP_179612
• Protein GI: 57238481
• COG category: [S] Function unknown
• COG ID: [COG0585] Uncharacterized conserved protein
• TIGRFAM ID: [TIGR00094] tRNA pseudouridine synthase, TruD family

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTTAG AGGAAGAGAA CACCATTTTT AAGCCTTTGT ATAGTTTAAA ACACAGTCCT 
ATTAATGCGT ATTTTAGTAA AAATAGCGAT GATTTTGTAG TGCGTGAAAG GCCTTTGTAT 
GAATTTAGCG GTAAGGGTGA ACATCTTATT TTGCATATCA ATAAAAAAGA TTTAACCACA 
AATGAAGCTT TAAAAATTTT AAGCGAAACA AGCGGGGTTA AAATAAGAGA TTTTGGTTAT 
GCAGGGTTTA AAGACAAGCA AGGATCAACC TTTCAATACC TTTCTATGCC TAAAAAATTT 
GAGAGTTTTT TGTCAAATTT TTCTCATCCT AAACTTAAAA TTTTAGAAAC TTTTATCCAT 
GAAAACAAGC TAAGAATAGG GCATTTAAAA GGAAATACTT TTTTCATACG CTTAAAAAAA 
GTTTTACCAA GCGATGCTTT AAAACTAGAA CAAGCTTTGA TGAATTTGGA TAAGCAAGGT 
TTTACAAATT ATTTTGGTTA TCAGCGTTTT GGAAAATTTG GGGATAATTA TAAAGAAGGG 
CTTGAAATTT TGCGTGGCAA AAAAATGAAA AATGTAAAAA TGAAAGAGTT TTTAATTTCA 
GCTTTTCAAA GTGAGCTTTT TAATCGCTAT TTGAGTAAAA GAGTGGAGTT ATCACATTTT 
GCAAATGATT TTAGCGAAAA AGAATTGATC CAAATTTATA AAATTTCTAA AGAAGAAGCT 
AAGGAACTTA AAAAACAAGA ACAATTTTTT AAGCTTTTAA AAGGTGAGGT TTTGGGGCAT 
TATCCTTTTG GAAAGTGTTT TTTATGCGAG GATTTAAGTG CTGAGCTTGG GCGTTTTAAG 
GCAAGAGATA TAAGCGCCAT GGGGCTTTTA ATCGGTGCTA AGGCTTATGA AACAGGAGAA 
GGTTTGGCCT TAAATTTAGA AAATGAAATT TTTAAAGATA CTTTGGAGTT TAAGGCTAAA 
ATGCAAGGTT CAAGACGCTT TATGTGGGGA TATTTAGAAG AGTTAAAATG GCGTTATGAT 
GAAGAAAAAG CTCATTTTTG TATAGAGTTT TTCTTGCAAA AAGGCTCTTA TGCTACTGTG 
GTTTTAGAAG AAATTTTGCA TAAAAATTTG TTTGAGTGA 

 

Protein sequence

MNLEEENTIF KPLYSLKHSP INAYFSKNSD DFVVRERPLY EFSGKGEHLI LHINKKDLTT 
NEALKILSET SGVKIRDFGY AGFKDKQGST FQYLSMPKKF ESFLSNFSHP KLKILETFIH 
ENKLRIGHLK GNTFFIRLKK VLPSDALKLE QALMNLDKQG FTNYFGYQRF GKFGDNYKEG 
LEILRGKKMK NVKMKEFLIS AFQSELFNRY LSKRVELSHF ANDFSEKELI QIYKISKEEA 
KELKKQEQFF KLLKGEVLGH YPFGKCFLCE DLSAELGRFK ARDISAMGLL IGAKAYETGE 
GLALNLENEI FKDTLEFKAK MQGSRRFMWG YLEELKWRYD EEKAHFCIEF FLQKGSYATV 
VLEEILHKNL FE