| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJE1605 |
|---|
| Symbol | |
|---|
| ID | 3232233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni RM1221 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003912 |
|---|
| Strand | - |
|---|
| Start bp | 1508138 |
|---|
| End bp | 1508863 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 26% |
|---|
| IMG OID | 637292956 |
|---|
| Product | capsular polysaccharide biosynthesis protein, putative |
|---|
| Protein accession | YP_179586 |
|---|
| Protein GI | 57238455 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATATACA ATAAAGAAAA ACTTGATGAG TGTATTAAAG ATTACCAAGA ATTGTGTAAA
ATTTTTGGTA ATATCTTGGA TGCACCATCA AAAGGTGGAA ATATTTCTAT AAAGAATGAT
GAATATTTTA TAATTAAGGC TTCAGGCGAG GATTTAAAAA AAGAGCATAA AATCTCTGTT
TTTAAAAATA ATATCAATTC TTTTTCTTAT TGTAAAGGTT ATTCTGAGGA TATTGCAAAG
CCATCTATGG AGATTAAAAT GCATATGGTG TTTAAAAATA AATATGTAGC ACATTATCAT
CCTGTTTATA TTTTACCTTA TTTGTGTGCT AAGGAATATA AATTTGTAAA TTACAAAACA
ATTGATTTTG CTTTACCTGG AAATGATTTA TATGAAGCAT TAAGTAAAAG TTATTCTTAT
CAAGAAAAGG GTATAGTGTT GCTGCGAAAT CATGGTGTCA TTGTTTATGC AGAGCAAATT
CAAGATATAA TAGAATTATA TAATCAATTA AAAAGTGATT TTTTTGAACA AAATGATTTT
GTGTATACTC CGGATGATGC AGTTGATAAG ATCAATGGGG AATTGTGGTT ATTTAGAAAT
GCGATGGAAA ATATTGCTTT AAAGAAACAA ATTAGTTTAA TCCCATTAAA AGTAGATGAA
ATTGATAAAT TATTAAATTT ACCTGATGAG CAATATAGAA AAAAAATTAT AGAAAGTGAG
AGTTAG
|
|---|
| Protein sequence | MIYNKEKLDE CIKDYQELCK IFGNILDAPS KGGNISIKND EYFIIKASGE DLKKEHKISV
FKNNINSFSY CKGYSEDIAK PSMEIKMHMV FKNKYVAHYH PVYILPYLCA KEYKFVNYKT
IDFALPGNDL YEALSKSYSY QEKGIVLLRN HGVIVYAEQI QDIIELYNQL KSDFFEQNDF
VYTPDDAVDK INGELWLFRN AMENIALKKQ ISLIPLKVDE IDKLLNLPDE QYRKKIIESE
S
|
|---|
| |