Gene CJE1413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCJE1413 
SymbollolD 
ID3231919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni RM1221 
KingdomBacteria 
Replicon accessionNC_003912 
Strand- 
Start bp1330348 
End bp1331013 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content31% 
IMG OID637292766 
Productlipoprotein releasing system ATP-binding protein LolD 
Protein accessionYP_179399 
Protein GI57238149 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.135411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAATT TAATCCAAGC AAATAAACTT ACTTTAGGTT ATGATGAACT AGTTATTAAA 
GAAGCGAGTT TTGCTTTTAA GGATGATGAT TTTGTTTTTA TTACGGGTAA AAGTGGGAGT 
GGTAAGAGTA CGCTTTTAAA GTCTTTTTAT GGAGATTTAG AACCTATTTC TGGTAAACTT 
GAAGTATGTG GATCTTTGAT GAATAAAATT GGAAATTTAG AACTTTTAAA ATTACGTCAA 
AGAATAGGGA TTATTTTTCA AGATTATAAA CTTGTACAAG AATATAGTGT TGAAAAAAAT 
GTTATGTTGC CTTTAATGAT TAAAGGTTAT AGCAAAAAAG TATGTCATGA TCAAGCTGCT 
AAGCTTTTAA AGCATGTAAA TTTAACTTTT AAAGCAGATA AATTGCCTAA TCAACTTAGC 
GGTGGTGAGC AACAACGCGT CGCTATGGCT AGGGCTTTAG CTCATAATCC AAAGCTTTTG 
CTTTGCGATG AGCCAACGGG AAATTTGGAC GAGTATTCTT CTGATATTAT ATGGACTCTT 
TTAAAATCTG CTAGAGAGCT TTTAGGAACT TGTGTTATAG TGGTAACACA TAGAATTCCT 
AGTAATTTAA GAGTGGATTA TCGTCGTTTT AATATAGAAA ATGGAAAAAT GAATGAAATT 
TTTTAA
 
Protein sequence
MPNLIQANKL TLGYDELVIK EASFAFKDDD FVFITGKSGS GKSTLLKSFY GDLEPISGKL 
EVCGSLMNKI GNLELLKLRQ RIGIIFQDYK LVQEYSVEKN VMLPLMIKGY SKKVCHDQAA 
KLLKHVNLTF KADKLPNQLS GGEQQRVAMA RALAHNPKLL LCDEPTGNLD EYSSDIIWTL 
LKSARELLGT CVIVVTHRIP SNLRVDYRRF NIENGKMNEI F