| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJE0934 |
|---|
| Symbol | psd |
|---|
| ID | 3231447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni RM1221 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003912 |
|---|
| Strand | + |
|---|
| Start bp | 872285 |
|---|
| End bp | 873085 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 637292291 |
|---|
| Product | phosphatidylserine decarboxylase |
|---|
| Protein accession | YP_178936 |
|---|
| Protein GI | 57237688 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0688] Phosphatidylserine decarboxylase |
|---|
| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTTT CAAAAGAAAG TTCGAGACTT TTTGGTTTTG TAGCGGGGAT TAAATTTCCT
AAAATGATAC AAAAAGTTAT TAATGAAAAT TATGTTAAGT ATTTTAATAT CGATATGAGT
GAATTTAAAA GCTCTTGTGA ATACGAGAGT TTAAATGCTC TTTTTACAAG AACTTTGCAA
ATTCCAAGAA AGCTTGAAGA AGGTTTTATC AGTCCAAGTG ATGGTAAAAT TTTAGAGTGT
GGAAGTACTT TTTTGGCAAA TGAAGAACAT TTTGCTTTTT CTATAAAAGG ACATACTTAT
AGCATTGAGG AGCTTTTAAA AGATAGCTTT GAAAAAGATG AGCTTAAAAA TGGGCTTGAT
TATGTCAATA TTTATCTTTC TCCAAAAGAT TATCATCGTT ATCACAGCCC TTGTGATATG
CAAATTTTAA GTGCAACTTA CACAAGTGGA GTGCTTTATA GCGTAAATGA AAAACATTTA
GAACGCATTA GTAATTTATA TGTAAAAAAT GAAAGAGTGA GCTTGAAATG TCAAAATGAA
AAAGGTATTT TTTGGCTTGT TTTTGTAGGA GCGCAAAATG TAGGAAAAAT GCGTTTTAAT
TTTGATGCAA GCATACAAAC CAATGCTAAA ATTTCTCATA ATTTTACTAG AAAATATGAA
AATTTAAATT TCAAAAAAGG CGAAGAACTA GGAAATTTTG AGCTAGGTTC TACTATAGTT
TTAATCTCTC AAAAAGGACT TTTAACTTTT AATTTAAAAG TAGGGCAGGG TATTAAATTT
GGAGAAAAAA TAGCGGATTA G
|
|---|
| Protein sequence | MSFSKESSRL FGFVAGIKFP KMIQKVINEN YVKYFNIDMS EFKSSCEYES LNALFTRTLQ
IPRKLEEGFI SPSDGKILEC GSTFLANEEH FAFSIKGHTY SIEELLKDSF EKDELKNGLD
YVNIYLSPKD YHRYHSPCDM QILSATYTSG VLYSVNEKHL ERISNLYVKN ERVSLKCQNE
KGIFWLVFVG AQNVGKMRFN FDASIQTNAK ISHNFTRKYE NLNFKKGEEL GNFELGSTIV
LISQKGLLTF NLKVGQGIKF GEKIAD
|
|---|
| |