Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE0813 |
Symbol | trmD |
ID | 3230763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | + |
Start bp | 746930 |
End bp | 747634 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637292168 |
Product | tRNA (guanine-N(1)-)-methyltransferase |
Protein accession | YP_178817 |
Protein GI | 57237015 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.151575 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATTTA GTTTCGTTTC TTTGTTCCCT AATCTTATGG AATTTTACTT CCAAGATTCT ATACTTGCAA GAGCAAAAGA AAAAAAACTT TTCAAACTTA ATTTTTATAA TCCAAGAGAT TTTTCTAAAA ATTCCTATCA TAAAGTCGAT GATTATAAAA TAGGTGGTGG AGCTGGACTT TTGATGCAAG CTGAACCTAT GTATGAGGTG CTAAGAAGTA TTCAAGAAAA AAAAGAAAAT CCCTATTTTA TTTTTTTAAA TCCAAGTGGT AAAACCTTTA ATCAAAAAGA CGCCAAACGC TTAAGTAAAA AAGAACATAT AGTTTTTGTA TGTGGGCGCT ATGAAGGTAT AGATGAAAGA GTGCTTGAAA TTTTTGCGAA TGAAATTTTT AGTATAGGGG ATTTTATTTT AACAGGAGGA GAATTACCTG CGCTTGTAAT GTGTGATGCG ATTTTAAGAA ATGTTAACGG GGTTTTAGGA AATATGGAAA GTTTGAAAGA AGAAAGCTTT GAAAATAATT TACTCGAAGC GCCTGCTTTT TCAAAACCTT TTATTTTTGA GAAAAAAAAT AAAAAATTTT ATACTCCTTC AGAGTTTTTA AAGGGTAATC ACGCTAGAAT TGCAAGTTTA AAAACTACTT TGGCGTCTTG CAAAACGAAA TTTTTTCGTC CAGATTTATT TTTAGAGCAT GAACGCAAAA AATAA
|
Protein sequence | MKFSFVSLFP NLMEFYFQDS ILARAKEKKL FKLNFYNPRD FSKNSYHKVD DYKIGGGAGL LMQAEPMYEV LRSIQEKKEN PYFIFLNPSG KTFNQKDAKR LSKKEHIVFV CGRYEGIDER VLEIFANEIF SIGDFILTGG ELPALVMCDA ILRNVNGVLG NMESLKEESF ENNLLEAPAF SKPFIFEKKN KKFYTPSEFL KGNHARIASL KTTLASCKTK FFRPDLFLEH ERKK
|
| |