Gene CJE0397 details

Gene Information

• Locus tag: CJE0397
• Symbol: trpB
• ID: 3231159
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter jejuni RM1221
• Kingdom: Bacteria
• Replicon accession: NC_003912
• Strand: +
• Start bp: 356515
• End bp: 357693
• Gene Length: 1179 bp
• Protein Length: 392 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637291755
• Product: tryptophan synthase subunit beta
• Protein accession: YP_178416
• Protein GI: 57237403
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0133] Tryptophan synthase beta chain
• TIGRFAM ID: [TIGR00263] tryptophan synthase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.256556
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAG CGTATTATGG GGATTTTGGT GGGCAGTTTT TGCCTGAAAG TGCAATGTTT 
GCTTTAAATG AGCTAGAAGG TGCTTTTTTG AAATTTTCTA AAGATAAACT CTTTAAAAAA 
GAATTAAACG AACTTTTAAA AACTTATGTA GGGCGTCCTA CTCCACTTTA TTTTGCTAGA 
AATTTAAGCA AAAAATATCA GCATGAAATT TATTTAAAAC GCGAGGATTT AAATCATACC 
GGAGCACATA AAATCAATAA TGCCATCGCT CAAGCCCTTT TAGCAAAAAA AATGGGAAAG 
AAAAAAATCA TAGCAGAAAC AGGAGCAGGT CAACACGGGC TTGCAACAGC CACTGCAGCA 
GCACTTTTAG GACTTGAATG TGAAATTTAT ATGGGGGCAA CCGATGTGCA AAGACAGGCT 
TTAAATGTTT ATAAAATGGA GCTTTTGGGT GCTAAAATTC ATGCAGTACA AAGTGGGCTT 
AAAACTCTAA AAGAAGCTAC TACTGCGGCT ATTCAAGCTT GGGTTGGAGA TATTAAAAAT 
ATTTTTTATG TGGTTGGAAG TGCGGTAGGT CCTTATCCTT ATCCTAAAAT GGTAATGCAT 
TTTCAAAGTA TTATAGGAAA AGAATGCAAA ATGCAACTTC AAAAACTCAA TAAAAAAGTA 
GATTATATTA TCGCAGCTGT TGGGGGTGGA AGCAATGCAG CTGGGATTTT TTATGATTTT 
ATCAAAGATG AAAATGTTAA ACTTATAGGT ATTGAAGCAG GGGGGCTTGG CATTGATACG 
CCTTATCATG CAGCGACTTT AAATAAGGGA AAAACAGGCA TTATTCACGG TATGAAAACC 
AAGGTTTTAC AAGATGATTT AGGCAATATC TTGCCTGTAC ATAGTGTTTC TGCAGGGCTT 
GATTATCCAG GAATTGGTCC TTTGCATGCT TTTTTATTTG AAAGCAAAAG AGCGCAATAT 
CATGCTATAA GTGATGAAGA ATGTATGCAG GCTTTAAAAT TACTTTGTAA AGAAGAAGGT 
ATTATTGCAG CGATTGAAAG TTCGCATGCT TTGGCATTTT TAGAAAAACT TTGTCCAACT 
TTAAAAAAGA AAAGCGTGAT AGTAGTAAAT CTTTCAGGCA GGGGAGATAA AGATATGCAA 
ATGATTAGAG ATTATAAAAA AGGGGTGATT TATGGTTGA 

 

Protein sequence

MKKAYYGDFG GQFLPESAMF ALNELEGAFL KFSKDKLFKK ELNELLKTYV GRPTPLYFAR 
NLSKKYQHEI YLKREDLNHT GAHKINNAIA QALLAKKMGK KKIIAETGAG QHGLATATAA 
ALLGLECEIY MGATDVQRQA LNVYKMELLG AKIHAVQSGL KTLKEATTAA IQAWVGDIKN 
IFYVVGSAVG PYPYPKMVMH FQSIIGKECK MQLQKLNKKV DYIIAAVGGG SNAAGIFYDF 
IKDENVKLIG IEAGGLGIDT PYHAATLNKG KTGIIHGMKT KVLQDDLGNI LPVHSVSAGL 
DYPGIGPLHA FLFESKRAQY HAISDEECMQ ALKLLCKEEG IIAAIESSHA LAFLEKLCPT 
LKKKSVIVVN LSGRGDKDMQ MIRDYKKGVI YG