| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3810 |
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| Symbol | |
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| ID | 4184704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 4397796 |
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| End bp | 4399781 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638073796 |
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| Product | glycogen debranching enzyme |
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| Protein accession | YP_680385 |
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| Protein GI | 110640175 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | [TIGR01561] glycogen debranching enzyme, archaeal type, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.38466 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACGAT TAGATAAGAC AGCCATTCAA ACAGATGTTC ACAAACTTTT TTATGGCTCT
TCTTCAGGAA AGCTATGGGA AGGTTCCGAA TGGCTTGAAA CCAATGGTTT GGGCGGATGG
GCCGGGAGTT CATTAAGCGG CTGTAATACC CGGAGATATC ACGGTATCCT GGTTGCTGCT
ACCAAACCAC CTACTGAGCG TACCGTATTG GTTAATAAAT TAGATGAGAT CATTGTTTTA
AATGACGAAT GGTTTCACTT AAGCACCAAC AAATACAGAG AATCGCTTTC TCCTCAGGGC
TATGTACACA TGGCTGAATT TAAAAAAGAA TTTTTTCCTG AATTTACGTT TGAAGTAAAC
GGTGTTGTGA TCCGCAAAAC AGTTGTTATG CTGCATGGCG AAAATACAAC CGTAATCATT
TACAATGTAC TTCAGGCGCC CACAACATTT ACATTTAAAT TACTTCCTCT TATTTCCGGC
AGAGATTATC ATTCCCTTCA TAAAGCAAAT GATGTGTTTG ATCCTGCCTG CACGTTTGAG
AACGGCGTAT TCAGGACACA ACCTTATCCA ACTTCACCGG AAATATTTAT TTCCATACCC
AATGCGTCGT TACGCAACGA CCCGAACTGG TTCTATCAGT TTGATTATGC GGTTGACCGT
TACAGAGGTT TAGAATGTGA AGAAGATCTG TTCAATCACG GTACCTTCTC CCTGTCACTT
AATGCCGGCG ATTCATTTGG TGTTATTCTT TCAACGAACG ATCCTGCAGG CAGAAATGCT
TTTGACTTAT ATGAGCAGGA AAGAGTGCGC AGAATGGGGC TTCTTAACGG CAGGACAGTT
AATTCAACGA TTGAACAATT AACGTTATCT GCCAATCAAT TTGTCGTGCA GCGTTCTGAA
TCGTTAAAAA CTGTAATAGC CGGTTACCAC TGGTTTACAG ATTGGGGCAG AGATACAATG
ATTGCATTGC CTGGGCTGTG TTTAACCACC GGCCGCTTTG ATGATGCAAA AAGAATTATA
AAAGCATTTG CAGAAAGCGT TCAGAATGGG ATGGTGCCAA ACCGTTTTAA AGATGGCGAT
GAAGCGCCGG AATACAACAA CGTTGATGGT ACGCTATGGT TCTTTGTAGC AGTATACCGT
TACCTGCAAA CTACTCAGGA CCGCAACTTT GTTCTGAATG AGATTCTTCC TGTTTTAAAA
GATATTGTTG ATCATCATTT CAAAGGAACA TTATACAACA TTAAAGTTGC TGAAGATGGC
CTGTTATTCG CGGGAGAAAC CGGCCAGCAA TTAACCTGGA TGGATGCCAA GGTTGGCGAC
TGGGTTGTTA CGCCACGTAT GGGTAAGCCC GTTGAGATCC AGGCATTATG GTATAATACG
TTAAAAATAT TCGCGTATTT ATTAGATACC AATAATCAGG CACACGATGC TGTGGCTATT
GAAGCATCGG CACAGAAAGT AAAAGACGCG TTCTTGTCGC GCTTCTGGAA CCAGGATGGC
AATTATTTGT ATGACCTGAT TGATGAAAAC GATCAGCCAA ATCCATCTAT CCGGCCGAAT
CAGCTTTTCG CTATCAGCCT TCCGTTCCAG CTTCTTGAAG CTGACAAGGC TCAGGCTGTT
TTCTATTGTG TGGAAGAGCA CTTATATACG CCTGTTGGTT TGCGGAGCTT AAGTCCGCAC
GACCATAATT ATTATGGTAT TTATCAGGGC GACTGGAGAA GGCGTGATGC ATCGTATCAC
CAGGGAACTG TTTGGAGCTG GCTGCTTGGG CCATACGTTG ATGTAATGAT GCGTGTAAGC
GGCGATCATG CACACCGTTT AAGCCAGAAA GTAATTTATA ATTTTGCTTA TCACCTGGAA
GAAAGCTGCA TCGGCAGTGT TTCTGAAATC TTTGACGGAG ACGCGCCGCA CTACCCGCGC
GGCTGTGTAG CTCAAGCCTG GGGTGTTGCA GAAGTATTAA GGGTTATTGA AGAATACAAT
TTATAA
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| Protein sequence | MLRLDKTAIQ TDVHKLFYGS SSGKLWEGSE WLETNGLGGW AGSSLSGCNT RRYHGILVAA
TKPPTERTVL VNKLDEIIVL NDEWFHLSTN KYRESLSPQG YVHMAEFKKE FFPEFTFEVN
GVVIRKTVVM LHGENTTVII YNVLQAPTTF TFKLLPLISG RDYHSLHKAN DVFDPACTFE
NGVFRTQPYP TSPEIFISIP NASLRNDPNW FYQFDYAVDR YRGLECEEDL FNHGTFSLSL
NAGDSFGVIL STNDPAGRNA FDLYEQERVR RMGLLNGRTV NSTIEQLTLS ANQFVVQRSE
SLKTVIAGYH WFTDWGRDTM IALPGLCLTT GRFDDAKRII KAFAESVQNG MVPNRFKDGD
EAPEYNNVDG TLWFFVAVYR YLQTTQDRNF VLNEILPVLK DIVDHHFKGT LYNIKVAEDG
LLFAGETGQQ LTWMDAKVGD WVVTPRMGKP VEIQALWYNT LKIFAYLLDT NNQAHDAVAI
EASAQKVKDA FLSRFWNQDG NYLYDLIDEN DQPNPSIRPN QLFAISLPFQ LLEADKAQAV
FYCVEEHLYT PVGLRSLSPH DHNYYGIYQG DWRRRDASYH QGTVWSWLLG PYVDVMMRVS
GDHAHRLSQK VIYNFAYHLE ESCIGSVSEI FDGDAPHYPR GCVAQAWGVA EVLRVIEEYN
L
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