| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3809 |
|---|
| Symbol | yijE |
|---|
| ID | 4184703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 4396606 |
|---|
| End bp | 4397502 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638073795 |
|---|
| Product | integral membrane protein |
|---|
| Protein accession | YP_680384 |
|---|
| Protein GI | 110640174 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.770617 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.329241 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACTGCTC AGGAAAACAA ATCAGAGAAA TTACTTTTTA CAGGTATTGT AGTGAGCATG
TTTTTCTGGG GCTTAAGCTG GCCTTCCGGT AAAGTGGCGG CTTCTTATGG CTCTCCTGTT
ACTATTGTTC TGATCCGGTA TATCGTTGTA TTCGCAGGCT TCTTACCTGT ATTCTTTTTT
ATGAAGGCAC CGCTGACCAT TCATAGAAAA GGCATTCCTT CATTACTGGC AGCCGGATTG
TTATTGTCTG CTTACACCTA TTTGTTTTTT TACGGATTGA AAAATGGCTT GGCCGGAGCA
GGCGGTGTAT TGGTTACAAC GATGAATCCG ATCATGGCTT ATAGTATCGG ATTGGTATTG
AATAGAAAAA AGCCGTCACG GAATGAAACG ATCGGATTGG TGCTGGGTTT AGTTGCCGGT
GCAACCTTAT TGAAAATATG GGGTAGTCTG GATGAACTCT TTGCATCCGG CAATATCTAT
TTTTTGCTGG CTGCCTTTGT ATGGGCAGTG ATGAGCCGGA TCACGTCGAA AGCATCTACT
TATGGCTCTT CTATGAGCTT CAGTTTATGG ATGTACCTGG CAACAGTTTT AATTATGATT
CCGTTTGTAA ACCTTACAGA CTTGAATAAT ATACTTCATA ACGCGGATCA GTATTTCTGG
TGGAACATTT TATTCAGCGG TATCTTTGCA ACATCACTTG CTACGAGCTA TTATTTTTAC
GCTACAACAA CTCTCGGTCC GGAGAAAGCA AGCAGTTTTA TTTTTTTAGT ACCGGTTTCT
GCAGCGGTGT CTTCTTGGGT ATTCCTAAAC GAAACATTAT TGCTGCATAC TATTATTGGC
GGCGTGTTAG GCATTGCGGC AGTATATATG ATCAATAGAA AAAAAGAAAT TATGTGA
|
|---|
| Protein sequence | MTAQENKSEK LLFTGIVVSM FFWGLSWPSG KVAASYGSPV TIVLIRYIVV FAGFLPVFFF
MKAPLTIHRK GIPSLLAAGL LLSAYTYLFF YGLKNGLAGA GGVLVTTMNP IMAYSIGLVL
NRKKPSRNET IGLVLGLVAG ATLLKIWGSL DELFASGNIY FLLAAFVWAV MSRITSKAST
YGSSMSFSLW MYLATVLIMI PFVNLTDLNN ILHNADQYFW WNILFSGIFA TSLATSYYFY
ATTTLGPEKA SSFIFLVPVS AAVSSWVFLN ETLLLHTIIG GVLGIAAVYM INRKKEIM
|
|---|
| |