Gene CHU_3793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3793 
Symbol 
ID4184129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4382698 
End bp4383573 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content36% 
IMG OID638073779 
Producthypothetical protein 
Protein accessionYP_680368 
Protein GI110640158 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.588351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.105005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGT TAATTGATAA AAATACCTTA AAATTATTAC GGGTACCTTT TTCTCTTTTT 
TTAATGCCCT TATTTTTATT GGCATTAAGC CAGTCTGGTG TCTATATTTT AAGCGTGTAT
GTACTTATAT CATTCTTTAT TATCCACTTT CTGGTTTATC CATCAAGCAA TGGGTATAAC
AGTTATATAG ACAAAGATGA AGACAGCATT GGCGGTCTGG AAAAACCTCC TATGCCAACT
AAAAAATTAT ATTATCTCAC CCTTGTACTG GATGTACTTG CACTACTGCT GGCATACTTC
CTTGTCAGTC CGTTGTTTGC TTTGTGTATA CTTATGTATA TGCTGGCTTC AAGAGCTTAC
AGTTCAAAAG AGATCCGGTT AAAAAAGTAT CCTTACATTG GTTTTCTGGT AGTAGTTTTT
TTTCAAGGCG CATTTACATA TTATACCTGC TATGCAGGTA TAACCGGCCA TGCCTTGGAG
CTGAATAAAC CTGCGTTGTT TTTGTTGCTG GCTGGTTCCT TCCAGATTGC AGGGGCGTAT
CCGTTAACGC AGATCTATCA GCATCAACAA GACCTGAGAG ATGGTGTTAT AACGATAAGC
TATAAGCTTG GATATGCCGG AACATTTATT TTTACCGGAA TAATGTTTAC AATCACAAAT
GTGTGCTATT TTATCTATTT CAATCTGACA GGAAAATTAA ACAATTTCTA TCTCGTGCAG
ATTTTCTTTA TTCCCATTGT CGCTTATTAT ATATATTGGT TCGTAAAAGT TCTTCAGGAT
ACAAAAGCTG CCAATTTTAA ACATACCATG TACATGAATC TTGTTGCAGC AATCTGTATG
AACAGCTGCT TTCTTGTATT ATACAGCATT AATTAA
 
Protein sequence
MTQLIDKNTL KLLRVPFSLF LMPLFLLALS QSGVYILSVY VLISFFIIHF LVYPSSNGYN 
SYIDKDEDSI GGLEKPPMPT KKLYYLTLVL DVLALLLAYF LVSPLFALCI LMYMLASRAY
SSKEIRLKKY PYIGFLVVVF FQGAFTYYTC YAGITGHALE LNKPALFLLL AGSFQIAGAY
PLTQIYQHQQ DLRDGVITIS YKLGYAGTFI FTGIMFTITN VCYFIYFNLT GKLNNFYLVQ
IFFIPIVAYY IYWFVKVLQD TKAANFKHTM YMNLVAAICM NSCFLVLYSI N