Gene CHU_3779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3779 
Symbol 
ID4183801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4372246 
End bp4372851 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content37% 
IMG OID638073765 
Producthypothetical protein 
Protein accessionYP_680354 
Protein GI110640144 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.527457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TCAACATTTT ACTTTTAATT GTTGCAGCTA TTGTAACATT CAGTTCTTGT 
ACAAAAGAAG AGGAAGTTAA ACCTGCCCCC ACACGTTTAC AAATCACTGT CAGAGATGAA
TTAGGTAATG CAGTATCCGG ATCAATTGTT AAGTTATATG CTACAGAAAC AGATTGGGAG
AATGAATCAA ATCAGGTAGG TTCAACACAG GTTTCAGACG CATCCGGTAT TGTAACATTC
TCAGATTTGT CCGCAATTAA ATATTACTGG TTCGCAGAAA AAGATTGTAA AAACAACGCT
AATGGTGCTG TCACTACAAC TACTGCTTTG ACAGTTAATG TTACCAATAC AAGTAATACA
GTTCTTTCAA GCACAGGTAC ATTATCGTTC AATAATACAT CAACAAACCC TTACCGCGTG
TTTGTAAATA ATGTTGAAGT GTTTACCATG AACGGTCAAA CGACAGAGCA AATAGATTAT
GTTCCAGCAG GTTCATATTC CATACGAGTA TTACAGGTAA GTGGCTATGC TGTTTATCCA
ACAGATCAAA CGTATACTGG AACTGTAAGC TGCGGGACTG CTCTTTCAGT TGTTTTTCCT
CAATAG
 
Protein sequence
MKKINILLLI VAAIVTFSSC TKEEEVKPAP TRLQITVRDE LGNAVSGSIV KLYATETDWE 
NESNQVGSTQ VSDASGIVTF SDLSAIKYYW FAEKDCKNNA NGAVTTTTAL TVNVTNTSNT
VLSSTGTLSF NNTSTNPYRV FVNNVEVFTM NGQTTEQIDY VPAGSYSIRV LQVSGYAVYP
TDQTYTGTVS CGTALSVVFP Q