Gene CHU_3770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3770 
Symbol 
ID4183793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4357682 
End bp4358677 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content38% 
IMG OID638073757 
Productb-glycosyltransferase 
Protein accessionYP_680346 
Protein GI110640136 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGTC CTGATATTGT AATTAACAAA ATTTCCGTTG TGGTGCCGGT CTACAACGAA 
GAAAAAAATA TTGCGGAACT CTGCAGCCGT TTACACCAGG TACTCTCTTC GTTACCGCAT
CGCTTTGAAA TTATTTTAGT AAATGATGGA AGCACGGATG ATTCTGCGGA TATTATTTCA
GAAATGTGCC TGGTGTTTTC TGAATTGAAA GGTATTGACC TGGCGGGTAA TTATGGACAG
ACAATTGCAT TGCGTGCCGG ATTTGAATTA GCCAAAGGAG ATGTAATTAT TGCGATGGAT
GGGGATTTGC AACATGATCC ACTGGATATT ATCCGCTTTA TGAAAAAAAT AGAAGAAGGG
TATGATCTGG TTGGTGGCTC AAAAGAAAAA AGGCCGGATA GCTGGTTGAA AAGCAAGCTG
TCAGCCATGG CCCATAAACT GATCCGTAAA CTGGCGCAGG TCGATATGAG TTATTTTGGC
GCCACGTACA AAGCATACAG AGCCTATTTG TTAAAGCAAT CTAATTTATT AGGCGACAAT
CATCGGTTTT TAGGGGCAAT TGTTGCACGC AAGGGAATCC GCTATACAGA AATACCGATA
ACGATTCACG AACGTTTACA CGGTGTCAGT AATTACAAAA TGAATAAAAT ATGGAAAGTG
CTTCTTGATT TAATTTTTCT GAAATTTTTT GTTTCGTATT TAAAAAAACC ATTCCGGTTA
TTTGGAAGCA TAGGCTTTGG TATGCTTTTT ATAGGACTGG TTTGTGTTGC GGGTTTTAGT
ATTGGTAATT TATTTTTCCA TTTAAATATT AAAGAACAGT ATATCGTAGA GTTTTTCTCC
AGTTGTATGC TGGTGATTAT GGGCATGCTT TTTATAAGCA TCGGCATTCT TGCTGAAGTA
GGCGTTTATA ATTATTTCGG GCAAAAAAGA ATGTCGCCCT ACTCTATCCG TTCCATTATT
ACGAATACAC AAAATGAAAA AAAGGCTGCT TCTTAA
 
Protein sequence
MPRPDIVINK ISVVVPVYNE EKNIAELCSR LHQVLSSLPH RFEIILVNDG STDDSADIIS 
EMCLVFSELK GIDLAGNYGQ TIALRAGFEL AKGDVIIAMD GDLQHDPLDI IRFMKKIEEG
YDLVGGSKEK RPDSWLKSKL SAMAHKLIRK LAQVDMSYFG ATYKAYRAYL LKQSNLLGDN
HRFLGAIVAR KGIRYTEIPI TIHERLHGVS NYKMNKIWKV LLDLIFLKFF VSYLKKPFRL
FGSIGFGMLF IGLVCVAGFS IGNLFFHLNI KEQYIVEFFS SCMLVIMGML FISIGILAEV
GVYNYFGQKR MSPYSIRSII TNTQNEKKAA S