Gene CHU_3719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3719 
Symbol 
ID4184497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4294184 
End bp4294825 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content39% 
IMG OID638073706 
ProductTPR domain-containing protein 
Protein accessionYP_680295 
Protein GI110640085 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.555314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAG AACAATTGAT TGAAAAATAC AAAAACCCTG CTATTATAGG CTTAGGAGTT 
ATCGTTGCTT TGATCGCTGC ATTTGTATTC TACAAATACA ATCAATCTGA AAACAATACC
GTTGCACAGG AAGAAATGTA CAAAGCGGTA TTTTATTTTG AACAGGATTC GTTAGAATTA
GCGTTGAAAG GCGATGAAGC TAAAGGGATC CGTGGCTTAC AGGAAGTAGC GGACGAATAT
TCCGGAACAA AAGCCGGCAA ACTAGCTGCT TTCTACACAG GTATTATTTA TTTGAAACAA
GCTAAATTTC AGGAGTCAAT CGATTACCTT GAAAAATTCA GCTCAAACGA AGGTATCCTG
CAGGCACGTA GCTGGGCTGC AATGGGTGAT GCATATTCTG AATTAAATGA TCTGGAAAAT
GCCATTAAGT ATTACAAAAA GGCTGCTGAT CATAAAGGTA ATGAGCAAAT CACACCTACC
TATCTCATGA AATTAGGATT AGCGTATGAA TTAAACAACA ACTGGAAAGA TGCTTCTGAT
GCATATGATA AGATAATCAC TGATTATCCA AAGTCTCAGG ATGTAGCAGA CGCCAAGAAG
TACAAAGCAA AGGCACAGGC TGCCCTTTCT GCTTCCGAAT AA
 
Protein sequence
MTAEQLIEKY KNPAIIGLGV IVALIAAFVF YKYNQSENNT VAQEEMYKAV FYFEQDSLEL 
ALKGDEAKGI RGLQEVADEY SGTKAGKLAA FYTGIIYLKQ AKFQESIDYL EKFSSNEGIL
QARSWAAMGD AYSELNDLEN AIKYYKKAAD HKGNEQITPT YLMKLGLAYE LNNNWKDASD
AYDKIITDYP KSQDVADAKK YKAKAQAALS ASE