| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3701 |
|---|
| Symbol | |
|---|
| ID | 4186423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 4274465 |
|---|
| End bp | 4275112 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638073688 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_680277 |
|---|
| Protein GI | 110640067 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.364527 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTTA TCAACCACTT TTTTCTTGGC TTTATTATAA GCTTCATTGG TACAATTCCT
CCTTCAACAT TTAATTTACT CGCAATCAAG CGGGCTACAT CAACCGGTCT GCGTAAAGCC
ATGACGTTTG CATGCGGTGC AGTATTGATA GAGTTTTTCT ATTGTTTCTT TGCTGTTATT
TTTTCAAGGT ATTTTCTGGC CAACAAAGCC ATTAGCGATA TCATAGAACT TATTGCTGTA
CCCGTTTTTT TGCTGCTGGC TTACATGTTC CTTACAAAAA AACATGTTGA ACCGACACCG
AACGAGCAAC AGCCAAAGGG TTCAACAGAT TTTGTCCAGG GATTATTTAT AGGCATTATT
AACCCAACAC AAATAACTTT CTGGCTGGGT TACAGTACCT ATTTTATAAG CACCGGCTGG
TTAAAAGAAG AGCTCCTATT CATGACAACC TTTGTAGTAG GCGTATGTGC AGGCAGCCTG
GTAATGTTGT TTATTTATGC GTATTACTGT AAAAAATGGT TCTATGGAAA TACACCGAAA
TTATTTACGG AAAAAGTGCT GAATAAAATT GTCGGTTTTA TTTTTATTGG ATTATCCTTA
ATGCAGTTGG GAAAGCTGAT TTGGCAGCAT TGGAGCAGTA AAATTTGA
|
|---|
| Protein sequence | MLLINHFFLG FIISFIGTIP PSTFNLLAIK RATSTGLRKA MTFACGAVLI EFFYCFFAVI
FSRYFLANKA ISDIIELIAV PVFLLLAYMF LTKKHVEPTP NEQQPKGSTD FVQGLFIGII
NPTQITFWLG YSTYFISTGW LKEELLFMTT FVVGVCAGSL VMLFIYAYYC KKWFYGNTPK
LFTEKVLNKI VGFIFIGLSL MQLGKLIWQH WSSKI
|
|---|
| |