| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3670 |
|---|
| Symbol | |
|---|
| ID | 4184643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 4238060 |
|---|
| End bp | 4239574 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638073657 |
|---|
| Product | auxin-regulated protein |
|---|
| Protein accession | YP_680246 |
|---|
| Protein GI | 110640036 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCCAC TTTTTAATTT TGCGATTAAA CAATTCATGA ATCAACGGAT GAAAAACATC
CGAGGATTCA TGGAACATCC GATTGAAACG CAGCAACGTG TTTTAAAGAA CCTGTTACAG
CAGGCAGCTT TAACTGAGTG GGGTAAAACA CATGGGTATA AAGACATTCA ATCCAACGAA
CAGTTTGCGC AGCAGGTACC AGTTTCAACC TATGAAACAT TCTACCCATG GATCGAGCGC
TGCCTGAAAG GTGAACAGCA GATCCTGTGG CAATCAGACA TCGATTGGTT TTCAAAATCT
TCCGGCACTA CAAATGCAAA AAGTAAATTC ATTCCCGTTT CGAAAGAATC CTTAAAAGAT
TGCCATTATA AAGGTGGCAT GGATTTGCTG ACCTTGTATT TTGACAATGC TCCGGAAAGC
AAATTATTTC AGGGGAAATC ATTAGCGGTT GGAGGGTCGT GTTCACCCAA TCCACACCGC
GACAATTCAA AGATCGGCGA TATTTCAGCC GTAATCATGG CAAACCTGCC TACCTGGGCA
CAGTACGCGC GTACACCATC CATTCAGACT GCATTGATGA ATGAGTGGGA AGCTAAGATT
GATAAGTTGG CCGAAGAATG CTCGAAAGAG AATGTAACAA ATTTGTCCGG TGTGCCTACC
TGGGCAGTAT TGCTGTTAGA GTACATGCTG GAAAAAAGCG GAAAAGAAAA CATGCTTGAG
ATCTGGCCGC ACTTTGAATG TTTCTTTCAC GGGGCCGTTT CATTTCATCC ATATAAAACG
GCTTTTCAAA AATTCTTTCC ATCCGATAAG GTCCGTTATA TGGAAACATA CAATGCATCC
GAAGGATTTT TTGGTGTGCA GGATGATCTG AGCAGAGATG ATCTGCTGCT GTATTTAGAT
CATGGTATTT ATTATGAATT TATTCCGATC GATGAAATTG ATGCGGAGTT TCCCAAAACA
ATATCGCTGG AGCAAGTACA GCTGAATGAA GCCTATGCGC TGGTAATCTC TACCAATAGT
GGCTTGTGGC GGTATAACGT AGGTGATGTG GTGCGCTTCA CTTCGATTAC ACCTTACAGA
ATAAAAATTA CCGGCCGCAC CAAACATTAT ATCAATGTGT TCGGCGAAGA GCTGATGGTT
GAAAATGCAG AGATGGCTGT TTCAAAAGCA TGTGAAGCTA CAAATGCCGT ACTGGCCAAT
TTTACTGCGG GCCCGATTTA TTTCAACAAT GAAAACAAAG GCGGTCACGA ATGGATCATA
GAATTTGAAA CAGCGCCAGG TGATAAAGAT CGGTTTACAC AGTTGCTGGA TCAGTTCTTA
AAAGAGCTGA ACTCCGATTA TGAAGCCAAG CGCTACAAAG ACATGGCCTT GTTGTTACCA
ACGATACATT TTGTTCCGGA AGGCACTTTT TATAAATGGC TCAAGCTGAA AGGCAAGCTG
GGCGGGCAAC ACAAAGTACC ACGCTTATCT AATAACAGGG AGTACCTGGA AGATATATTG
ACGAAGTGTT TGTAG
|
|---|
| Protein sequence | MIPLFNFAIK QFMNQRMKNI RGFMEHPIET QQRVLKNLLQ QAALTEWGKT HGYKDIQSNE
QFAQQVPVST YETFYPWIER CLKGEQQILW QSDIDWFSKS SGTTNAKSKF IPVSKESLKD
CHYKGGMDLL TLYFDNAPES KLFQGKSLAV GGSCSPNPHR DNSKIGDISA VIMANLPTWA
QYARTPSIQT ALMNEWEAKI DKLAEECSKE NVTNLSGVPT WAVLLLEYML EKSGKENMLE
IWPHFECFFH GAVSFHPYKT AFQKFFPSDK VRYMETYNAS EGFFGVQDDL SRDDLLLYLD
HGIYYEFIPI DEIDAEFPKT ISLEQVQLNE AYALVISTNS GLWRYNVGDV VRFTSITPYR
IKITGRTKHY INVFGEELMV ENAEMAVSKA CEATNAVLAN FTAGPIYFNN ENKGGHEWII
EFETAPGDKD RFTQLLDQFL KELNSDYEAK RYKDMALLLP TIHFVPEGTF YKWLKLKGKL
GGQHKVPRLS NNREYLEDIL TKCL
|
|---|
| |