Gene CHU_3652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3652 
Symbol 
ID4184313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4208913 
End bp4209806 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content39% 
IMG OID638073639 
ProductFKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) 
Protein accessionYP_680228 
Protein GI110640018 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAG TATACATCAT TCTGGGTTTT TGTTTTCTAA GCATATCTGT TTTTGCTCAG 
AAAAAACAAA AGACTCCAAG CAAGGCATCT CTATTTCATG AAAAGGATGT AGCCTATACA
CCCTCAGGTT TGGCATACAA ATACAGACTT GATGTGCCGG GTAAAACCGG GGCAGTAGGT
GATGTTGTAA AACTGCATTT TGTATTGCGT AACAGTAAAG ATTCAATTCT GCGCAGTACC
ATAGAGGAAG ACAGGATGGT TATTACAACC ATTCAAAAAC CAAGGTATGC AGCATCCTTT
GAAGAAGGTC TGGGAATGCT TTCTAAAGGA GACAGTTGTG CATTCTGGAT TTCAGCAGAT
TCACTTTTTA AAAAAGGTAT TGGTGCTGAA ATGCCGCCCT TTATTGAAAA AGGAAGCTTC
CTTCGTTTTG AAGTAAAGAT GTATGACGTA TTAACAATGG CAGAATATGT TGAGGAACAA
GAAATTATGG CAAAAAAAGT AAAAGCAGAT GAAGATGCGG CATTAGCATC ATACATCAAA
ACAAATAATA TTCCGGCTGT GTTAGACACG GCAACAGGTG TATATTACCA GGTGGTTCAG
GCAGGCACAG GTGCTAAACC TAAAAAAGGA AACAAAGTAA TTGTTCATTA TACCGGGCAT
TTATTAAACG GAGAAATTTT TGACAGTTCA CTCGATCGGG GAGATCCGTT TGATTTTATC
ATCGGACAAG GCCGCGTAAT TGAAGGCTGG GATGAAGGTA TTCCATTGAT GCGAAAAGGA
GAAAAAGGAA TTTTATACAT TCCATCCTAT CGCGGTTATG GAGAGCAGCG TGCCGGAAGC
ATTCCCCCTA ATTCTACATT GATATTTGAA GTTGAATTGC TGGATATAAA GTAG
 
Protein sequence
MNKVYIILGF CFLSISVFAQ KKQKTPSKAS LFHEKDVAYT PSGLAYKYRL DVPGKTGAVG 
DVVKLHFVLR NSKDSILRST IEEDRMVITT IQKPRYAASF EEGLGMLSKG DSCAFWISAD
SLFKKGIGAE MPPFIEKGSF LRFEVKMYDV LTMAEYVEEQ EIMAKKVKAD EDAALASYIK
TNNIPAVLDT ATGVYYQVVQ AGTGAKPKKG NKVIVHYTGH LLNGEIFDSS LDRGDPFDFI
IGQGRVIEGW DEGIPLMRKG EKGILYIPSY RGYGEQRAGS IPPNSTLIFE VELLDIK