| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3587 |
|---|
| Symbol | |
|---|
| ID | 4186794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 4136123 |
|---|
| End bp | 4136998 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638073574 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_680163 |
|---|
| Protein GI | 110639953 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.171547 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTTTACAGCT TCTTGGATTA ACAATCATTT CGTCATCTGC ATTTGCTCAG
ACTCAAGTGC CGAATGCTGA TTTTGAAAAC TGGACATTAT ATAAGCCCGC ATATAATTAT
TATGCTGCAA ACGATTGGAG TGATGGGGCC GCTTGCGTTT CAGTAAATGG CGGTACAGAA
TCCTGTCAAT TTGTAAACAG ACGCACAACC AATGCACAAT CCGGTACATA TGCACTGCAG
CATTTTGATG TAGCATTCGC TTCGCAGGGA GGAGGGTCAA GTGTAAATGC GCTTCCTTTC
TGGAACCTTG ATGAAAACTT TGATGGTGTT GCTTTTACTG GTCGTCCTAC ATCTGTATCG
TTTTACTATA AGTATGCAAC AGATGACAAC CAACCTATGT CTATTGAATT TATGTTATAT
TCCGGTAACC TTTTGGGTGA CCCTACTATG ATTGGTGTCG CTACGTTTGA TTTTTCAACT
GTACAGAGTA CATATAAAAA AGTGGATCTG GATTTTACTT ATACCAGCAC AGATGTACCA
ACAAACATTT TTATCAAAAG TGATTTTTCA GGAGATGGTA ATCCTAAAAC AGCGCTTGAT
ACGTTAACGT GGGACAATAT TGTGTTCAAT TATACAGCTA CTGATGTAAC CGACAAGTCA
AGTCCTGATT ATTTTACAGT TTCTACTTCT AATAAGGTAT TGTCAACGTC AAGAGATATT
CATGCCGTTA CGATATTAGA CTACACAGGA AGAACCGTTG CTTCTTTTGA GAATACATCC
AGTAATTTTG ATGTTGCTCA GTTGAAAACT GGTATCTATA TCTTAACCGG AACAATTAAT
ACCACTCCGT TTTCAAGGAA AATAATTATT GAATAA
|
|---|
| Protein sequence | MKKILQLLGL TIISSSAFAQ TQVPNADFEN WTLYKPAYNY YAANDWSDGA ACVSVNGGTE
SCQFVNRRTT NAQSGTYALQ HFDVAFASQG GGSSVNALPF WNLDENFDGV AFTGRPTSVS
FYYKYATDDN QPMSIEFMLY SGNLLGDPTM IGVATFDFST VQSTYKKVDL DFTYTSTDVP
TNIFIKSDFS GDGNPKTALD TLTWDNIVFN YTATDVTDKS SPDYFTVSTS NKVLSTSRDI
HAVTILDYTG RTVASFENTS SNFDVAQLKT GIYILTGTIN TTPFSRKIII E
|
|---|
| |