Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3541 |
Symbol | cusS |
ID | 4186595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 4096437 |
End bp | 4097783 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638073528 |
Product | sensor kinase of copper sensing two-component system |
Protein accession | YP_680117 |
Protein GI | 110639907 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0485338 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.197924 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTACTAG AACTGTTTTT AAAAGGCATT AATTCAAAAA TCGAATCCAT CGATGCAAAA CGTATTTACT TTGTAAATGT TTTGTCTTTG TTATGTTTGT TTACATCCAT AGCAATTGTC ATTCCTTACA TAATACTTAA CCTGCACGTG CTTGCCGGAG TGTGCGTGAT TTTTTCTGCC GGTTATGTAA TCAGCTTTAA TTTTAATGCA CGGGGTTTGT ATAGTGTTGC CAAATCATTT TTATTTTCAA CAATAGCCAT AAACATCTTT GCCTTATCGG TAATCTTCGG AAGCAGAATA AATATGACTG TTTTTTATAT TCCGTTAGTG GTAATTTTGT TTTTGCTATT TGACAAAGAA CACAGAGCTG CATTTTTTGT TTCAATCATT GTTGTAATAG CTATGTGTAT ACTGGGCTTT GTGATGAATA ATTTTACCGT GAGTTCTTTA ATGGTTTTAG AAGAAACAGA GATTTTTATT ATTAATACGA TATTCAGCGG AGTGTCGTTG TTTGGTACAT TATTCGTTTG TTATGTATTT ATTTTTTCTT CAGAACTGCT GCTAAAGGGT TTGGCAAAAA AAAATGAACG CTTGCAGCAG GAGCGTAATG CACTCTATGA ATCTACCATT CAATTAAATA AGACAGCACA AGAGCAGGAA GACCTGAATA CGTTAAAAAA TAAATTGTTA TCCATCATTT CGCATGATGT GCGCCAGCCG GTAAACAATC TGTTGAGTCT TTCAGAAATT ATGCTTCAGG CAAAAATATC AGAAGAAGAA ATTCAGCTGC TTGGGTTACG GTTAAAGGAA ACATCTATTT ATGTATATCA AATGCTGGAC AATCTCCTTA CCTGGTCCTA TTCTCAAATG AATGGCTTAC ATCCTGAGCC TATAAAACTG ATTCTGAAAG AGGATATTGA AAAGGAACTG AAGAACCTCT CGTATTTAAT AGATCAAAAG AAAATCCATA TTGAATTAAA CGTGAACGAT GCTGACCACA TTCAATTTGA TAAAGTAATG TTTCAGATCG TATTTAGAAA CATTGTGAGC AACGCAATAA AATTTTCTCA GGCAGAAGGC CGTATTAGAA TTAACACAGA AAAAGCAGAC AATAAAATTG CCTTATCAAT AAGTGATGAT GGGATTGGTA TTCCAAAGGA AATTATGGAA AAGCTTTTTG TAAATAATTT CTCTAAAAAC AGATTTGGCA CACAAAATGA AAAAGGGGCA GGTATTGGTT TGATGTTGTG CAAACAGCTG ATGGATGCAA ACAATTCAGA AATAAAGGTT AAATCCAATT TGGGCAAAGG CTGTACGTTT GTACTTATTT TTCCTGCAGG CTCTTAA
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Protein sequence | MLLELFLKGI NSKIESIDAK RIYFVNVLSL LCLFTSIAIV IPYIILNLHV LAGVCVIFSA GYVISFNFNA RGLYSVAKSF LFSTIAINIF ALSVIFGSRI NMTVFYIPLV VILFLLFDKE HRAAFFVSII VVIAMCILGF VMNNFTVSSL MVLEETEIFI INTIFSGVSL FGTLFVCYVF IFSSELLLKG LAKKNERLQQ ERNALYESTI QLNKTAQEQE DLNTLKNKLL SIISHDVRQP VNNLLSLSEI MLQAKISEEE IQLLGLRLKE TSIYVYQMLD NLLTWSYSQM NGLHPEPIKL ILKEDIEKEL KNLSYLIDQK KIHIELNVND ADHIQFDKVM FQIVFRNIVS NAIKFSQAEG RIRINTEKAD NKIALSISDD GIGIPKEIME KLFVNNFSKN RFGTQNEKGA GIGLMLCKQL MDANNSEIKV KSNLGKGCTF VLIFPAGS
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