| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3479 |
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| Symbol | yedO |
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| ID | 4184899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 4026145 |
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| End bp | 4027053 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638073467 |
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| Product | 1-aminocyclopropane-1-carboxylate deaminase |
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| Protein accession | YP_680056 |
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| Protein GI | 110639846 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.120308 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATCAAA GTCCACTTCA ACCTATCATT TTACCACAAA CAGAAAAGGC TGGTGTACAA
TTGTATCTGA AGCGCGACGA TCTCATTCAT CCCTTATATG GCGGTAATAA GATCCGGAAG
TTAAAGTACA ATGTGCAGCA ATGTTTGCGT GAAGGTAAAA TAGGTTTGCT CACCTGCGGC
GGCGCCTACT CCAACCACAT TATTGCAACG GCAGCGTATG GAAAAGAGCA TGGTTTGAAA
ACCAAGGCAA TCATTCGCGG AGAAGAGCTG CTGATTGATA ACCCTACGCT TAAAGATGCG
GCAGCACTTG GGATGGAATT TGTTTTTGTT TCAAGAGAAA CATACCGAAG CATTCGTGAA
CAAAATGCGT TGGCTTTTGA TTTAAGTAAA TCGAATTATA ACGAATGGTA TTTTATTCCC
GAAGGCGGCA CCAATGCTTT TGCTGTTGAA GGTATTGCAG AACTGGTAGC TGAAATTGAA
ATCCCGTTTG ATTATATCGC TACACCCTGC GGTACGGGTG GTACTTTTGC CGGTTTGATG
AAAGGCATTA AAGTTTATTC GCCGTGGCGA ACGAAACTGC TTGTTTTTTC GGCGTTGAAA
AACGGTAATT ATATTATTGA TGAAGTGGCT GAATTGCTGA AAGCAGATTT TGACAGAACA
ACGTTAGAGT TGTTTACTTC AGAGTACGTG TTTGGCGGCT ATGGAAAGGT GAAACCTGAA
CTGATTGCTT TTGTAAAATC GTTTGAGCAT CAGACAGGAA TTTTATTAGA TCCTATTTAT
AACGGGAAAA TGATGTTTGG TCTGTTGGGT AAAATTGAAA GTGGCTATTT TAAAAAGGGT
TCAGTGATTG TTGCTATTCA CACTGGAGGA ATCCAAGCCT GGAGAGGGTT TAACAATAAT
TTTACTTAA
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| Protein sequence | MHQSPLQPII LPQTEKAGVQ LYLKRDDLIH PLYGGNKIRK LKYNVQQCLR EGKIGLLTCG
GAYSNHIIAT AAYGKEHGLK TKAIIRGEEL LIDNPTLKDA AALGMEFVFV SRETYRSIRE
QNALAFDLSK SNYNEWYFIP EGGTNAFAVE GIAELVAEIE IPFDYIATPC GTGGTFAGLM
KGIKVYSPWR TKLLVFSALK NGNYIIDEVA ELLKADFDRT TLELFTSEYV FGGYGKVKPE
LIAFVKSFEH QTGILLDPIY NGKMMFGLLG KIESGYFKKG SVIVAIHTGG IQAWRGFNNN
FT
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