Gene CHU_3461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3461 
Symbol 
ID4186039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4005924 
End bp4006871 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content38% 
IMG OID638073449 
Producthypothetical protein 
Protein accessionYP_680038 
Protein GI110639828 
COG category[S] Function unknown 
COG ID[COG2307] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0172229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATCTA GAATTGCAGG AAATTTGTTT TGGATGGGTA GATACCTTGA GCGAACAGAA 
CACATCAGTC GTTTTTCACA GGCACATTAT TTCTTTAGTA TTGATGCGCC TAAATCGGTT
AAGAAAGAAC ATATTTTAGA GTCGGTTTTA AATATGGCCG GCTCTTATGT AGAGTACCTT
GGCAGCGGTA ATAAAATGGA GACAATGGAA GTTGCCTATT ATATCGGGCT GAACGAATTC
AATGCTTCTT CCATTAAACA CTCCATTGTC AAAGCGAGGG AAAATGCACG CGGAGCAAAG
GATTCTATTT CAAGTGAATT GTGGCAGTCG ATCAATACGT TTTATCATTC GATCAACTTA
ATGGATCGCG CAACATTCAA TGAAATGGGT ATTTATGAAT TTTCTAAAAA TGTGCTGCAA
AACAGTTCAG TGATCAAAGG AAATATTGAT AACACCTTGC TGCACGAAGA AGCATGGTCC
ATCATTCATC TGGGCCAGCA CATTGAACGT ACCACACAGG TAATACGCAT GATCGTAACC
AAGATCAATG ATATAAACCG TATTCCGAAA AAGGAATATT ATAACATGAT TGAATTGTTT
GAAAATGTGA ACCTGCTGAA AAGTACCGAA GCGTATGACA TGAGTAAAAT ATTTTACAGA
GAAGTACCGA GCGTAAGCCA TAGTCTGGAG TTTCTAACAC TGAACAGAAA TTTTCCAAAA
TCAATTGTAT ATAACCTGCG ACATATTGAA CACTGTTTGC TGCGCATTAC AAACCTGTCG
AAACATGAAA CAAATTCACT GGAATTTTAC GCAAGTAAAT TGCTCTGCAC CGTGAAGTAT
ACCTCGATTC AGGATATTGA AAAGGAACCC TTAGCGTTTT ATAATGATTT GTTGAACAAG
GTAGCGAAGC TTGCAGATAT GCTCGAAACC AAATACTTAC AATATTGA
 
Protein sequence
MLSRIAGNLF WMGRYLERTE HISRFSQAHY FFSIDAPKSV KKEHILESVL NMAGSYVEYL 
GSGNKMETME VAYYIGLNEF NASSIKHSIV KARENARGAK DSISSELWQS INTFYHSINL
MDRATFNEMG IYEFSKNVLQ NSSVIKGNID NTLLHEEAWS IIHLGQHIER TTQVIRMIVT
KINDINRIPK KEYYNMIELF ENVNLLKSTE AYDMSKIFYR EVPSVSHSLE FLTLNRNFPK
SIVYNLRHIE HCLLRITNLS KHETNSLEFY ASKLLCTVKY TSIQDIEKEP LAFYNDLLNK
VAKLADMLET KYLQY